Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NXF3Q9H4D5 AL442639.1-201ENST00000625030 1899 ntBASIC5.22□□□□□ -1.57
NXF3Q9H4D5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NXF3Q9H4D5 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NXF3Q9H4D5 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.57
NXF3Q9H4D5 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 Z98755.1-201ENST00000407015 1384 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 RNA5SP332-201ENST00000391063 115 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AL358178.1-201ENST00000407698 397 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC016831.4-201ENST00000438302 307 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 CEACAMP6-201ENST00000452007 574 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC093890.1-201ENST00000502554 540 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 ENPP7P9-201ENST00000514456 627 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 RNU6-709P-201ENST00000517257 104 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC020937.1-201ENST00000519677 1013 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AL110118.1-201ENST00000553543 400 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC093249.4-201ENST00000564755 259 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 ELOCP28-201ENST00000590044 317 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AC132825.8-201ENST00000640783 297 ntBASIC5.21□□□□□ -1.58
NXF3Q9H4D5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
NXF3Q9H4D5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 MIR141-201ENST00000384975 95 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 RNU1-82P-201ENST00000390851 165 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 RPS4XP9-201ENST00000405151 780 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 NIPA2P1-201ENST00000426223 976 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC092162.1-201ENST00000432828 434 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC013410.1-201ENST00000436223 1232 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 MRPL35P2-201ENST00000448009 511 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AL356981.1-201ENST00000454879 684 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 RN7SL860P-201ENST00000473738 223 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC073358.1-201ENST00000505671 684 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC092593.2-201ENST00000513866 913 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 Y_RNA.719-201ENST00000517156 106 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 RBPJP2-201ENST00000618187 1444 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NXF3Q9H4D5 SMG1P6-201ENST00000532337 2930 ntBASIC5.2□□□□□ -1.58
NXF3Q9H4D5 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 TET1P1-201ENST00000426627 2301 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC093849.1-201ENST00000563631 2209 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC016397.1-201ENST00000412463 242 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC111000.3-201ENST00000508057 576 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC005868.1-201ENST00000536421 331 ntBASIC5.19□□□□□ -1.58
NXF3Q9H4D5 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NXF3Q9H4D5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms