Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 SNORA51.9-201ENST00000384295 124 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MT-TP-201ENST00000387461 68 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 RNA5SP178-201ENST00000410380 128 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC079809.1-201ENST00000415468 276 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 RPS4XP5-201ENST00000419038 768 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC104843.2-201ENST00000427666 297 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 CALM1P2-201ENST00000452941 448 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LSM3P4-201ENST00000502948 309 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MTND1P22-201ENST00000510572 951 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MTATP6P1-201ENST00000514057 681 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC138938.1-201ENST00000515431 782 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC027369.2-201ENST00000528030 440 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 OR4A43P-201ENST00000532938 908 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC068790.2-201ENST00000602601 557 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC092266.1-201ENST00000610958 165 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 FRG1HP-204ENST00000617940 757 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AL603755.1-201ENST00000619504 163 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MIR6886-201ENST00000619864 61 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC129778.1-202ENST00000623812 261 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AC011815.3-201ENST00000624194 473 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AL591379.1-207ENST00000635982 261 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC01808-202ENST00000641680 1116 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 DDX18P5-201ENST00000534547 1306 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 YES1P1-201ENST00000418510 1628 ntBASIC5.41□□□□□ -1.54
AMBRA1Q9C0C7 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL161912.4-201ENST00000623889 2468 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RNU5A-2P-201ENST00000384337 116 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 LYPLA1P3-201ENST00000402650 695 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL512422.1-201ENST00000407033 553 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RPL35AP3-201ENST00000414680 288 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 MTCO3P5-201ENST00000433620 714 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC023141.3-201ENST00000436698 278 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC092170.1-201ENST00000440211 356 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC104978.1-201ENST00000449387 391 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 NPM1P19-201ENST00000450070 712 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RNU6-1129P-201ENST00000515964 104 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RN7SKP35-201ENST00000517210 151 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 HIGD1AP18-201ENST00000520730 278 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC010306.1-201ENST00000523223 1117 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 RBM22P12-201ENST00000567098 1255 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 TXNP4-201ENST00000575018 310 ntBASIC5.4□□□□□ -1.54
AMBRA1Q9C0C7 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms