Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GAPDHP33-201ENST00000443168 1013 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 SNRPGP9-201ENST00000456025 225 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MTCO3P2-201ENST00000457365 171 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AL603882.1-201ENST00000463059 681 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MARK2P8-201ENST00000476069 952 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC116347.2-201ENST00000514912 523 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MTND5P4-201ENST00000514978 288 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC074029.1-201ENST00000552531 1044 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 RN7SL199P-201ENST00000578752 281 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 RN7SL656P-201ENST00000579044 281 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 RN7SL404P-201ENST00000582421 281 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MIR4271-201ENST00000582451 67 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC068790.6-201ENST00000602558 258 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 HSPE1P14-201ENST00000605812 302 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 DLEU2_1.1-201ENST00000612089 120 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MIR7109-201ENST00000613748 65 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 DLEU2_1.2-201ENST00000614667 120 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC012676.3-201ENST00000614983 479 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AC015712.7-201ENST00000615211 635 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 AL596275.2-208ENST00000641192 594 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 5S_rRNA.29-201ENST00000641250 107 ntBASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TRAIPQ9BWF2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 CLCA3P-203ENST00000490028 2781 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 LINC01613-201ENST00000561476 2780 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RNU6-984P-201ENST00000363236 109 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RNU6-501P-201ENST00000364072 100 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RNA5SP512-201ENST00000364550 120 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 OR5H15-201ENST00000383696 930 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RNU6-723P-201ENST00000383973 107 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RNU1-149P-201ENST00000390870 161 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RPL31P52-201ENST00000407532 367 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AL031779.1-201ENST00000415663 330 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AL049610.1-201ENST00000423374 372 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC005033.1-201ENST00000428904 813 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 MTND1P34-201ENST00000438556 671 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AL020997.1-201ENST00000446554 349 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 VN1R10P-201ENST00000447106 875 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RN7SL382P-201ENST00000482631 282 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 CR383658.1-201ENST00000514609 734 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 RFPL4AP5-201ENST00000514977 504 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 SNORA74.1-201ENST00000516320 180 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC106785.4-201ENST00000569492 412 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AP003115.1-201ENST00000569849 463 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 SNORD39.3-201ENST00000584451 71 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC104073.3-201ENST00000610942 955 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AL356596.1-201ENST00000624230 379 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 SNX18P10-201ENST00000625014 519 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 TEX41-254ENST00000626394 423 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC084035.1-201ENST00000634543 607 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 MTND4P5-201ENST00000435821 1374 ntBASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.28□□□□□ -1.24
TRAIPQ9BWF2 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms