Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC004817.4-201ENST00000602396 3625 ntBASIC6.18□□□□□ -1.42
ABCA3Q99758 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
ABCA3Q99758 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
ABCA3Q99758 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.18□□□□□ -1.42
ABCA3Q99758 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
ABCA3Q99758 OR51H2P-202ENST00000641424 3046 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
ABCA3Q99758 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 RNA5SP283-201ENST00000365604 119 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 RNU6-761P-201ENST00000384148 107 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 OR13Z1P-201ENST00000416141 834 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 TMBIM7P-201ENST00000418074 855 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 AL451139.1-201ENST00000434718 346 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 RPL23AP52-201ENST00000439311 478 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.17□□□□□ -1.42
ABCA3Q99758 HNRNPCP4-201ENST00000571636 900 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 AC006453.5-201ENST00000636451 619 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
ABCA3Q99758 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 EIF2AP4-201ENST00000424793 1781 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 AC017104.4-201ENST00000636283 1592 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 AL137918.1-201ENST00000624542 1922 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.17□□□□□ -1.42
ABCA3Q99758 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
ABCA3Q99758 AL079305.1-201ENST00000623159 3008 ntBASIC6.17□□□□□ -1.42
ABCA3Q99758 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ABCA3Q99758 RNA5SP387-201ENST00000364226 106 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCA3Q99758 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
ABCA3Q99758 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 IGKV2-23-201ENST00000518729 323 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.16□□□□□ -1.42
ABCA3Q99758 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
ABCA3Q99758 AC091979.2-201ENST00000607514 214 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.16□□□□□ -1.42
ABCA3Q99758 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ABCA3Q99758 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 MIR554-201ENST00000384874 96 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 U3.35-201ENST00000408405 208 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 RCC2P2-201ENST00000422174 918 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.16□□□□□ -1.42
ABCA3Q99758 RPL23AP83-201ENST00000434984 473 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 H2AFZP5-201ENST00000446960 382 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 AC090142.1-201ENST00000465776 462 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 RPS27AP16-201ENST00000492222 470 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 AP003730.1-201ENST00000524605 285 ntBASIC6.16□□□□□ -1.42
ABCA3Q99758 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
ABCA3Q99758 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.16□□□□□ -1.42
ABCA3Q99758 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
ABCA3Q99758 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCA3Q99758 DHX9P1-201ENST00000436565 3076 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ABCA3Q99758 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 AL161909.1-201ENST00000397390 712 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.15□□□□□ -1.42
ABCA3Q99758 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
ABCA3Q99758 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCA3Q99758 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCA3Q99758 RPL35P6-201ENST00000490024 372 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCA3Q99758 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.15□□□□□ -1.42
ABCA3Q99758 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.15□□□□□ -1.42
ABCA3Q99758 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
ABCA3Q99758 AC111000.6-201ENST00000514471 709 ntBASIC6.15□□□□□ -1.42
ABCA3Q99758 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms