Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC004448.2-201ENST00000422360 586 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 FABP7P1-201ENST00000424004 391 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 CKS1BP6-201ENST00000424932 240 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 OTX2P1-201ENST00000450956 354 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RN7SL170P-201ENST00000487098 295 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RN7SL214P-201ENST00000487317 265 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AL117692.1-201ENST00000494283 713 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC146944.2-203ENST00000502493 354 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 APOBEC3AP1-201ENST00000511396 287 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC139495.1-202ENST00000513164 354 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RN7SKP5-201ENST00000517045 272 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC005868.1-201ENST00000536421 331 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC090312.1-201ENST00000580637 348 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 OR1AB1P-201ENST00000585564 761 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC087783.2-201ENST00000605070 562 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC103858.2-201ENST00000621471 543 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC090971.4-201ENST00000560291 1800 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AC107021.2-201ENST00000567714 2095 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL445487.1-201ENST00000415694 1580 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL136164.3-201ENST00000624429 3978 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 RNA5SP284-201ENST00000384547 118 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 SNORD96B-201ENST00000386148 79 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 LRRC37BP1-201ENST00000398851 714 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL592291.1-201ENST00000403830 352 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 NUDT19P3-201ENST00000404698 555 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 SKP1P3-201ENST00000429280 487 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC104306.1-201ENST00000449702 371 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL691482.1-201ENST00000453255 87 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 RPS26P28-201ENST00000470806 348 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 RN7SL817P-201ENST00000480777 288 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 Vault.2-201ENST00000516519 98 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 Y_RNA.719-201ENST00000517156 106 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 IGKV2-4-201ENST00000523070 340 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 TOMM20P1-201ENST00000534518 427 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC107958.1-201ENST00000556576 290 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL121834.1-201ENST00000572284 509 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC008638.3-201ENST00000603341 463 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC010245.2-201ENST00000606908 1167 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC074029.4-201ENST00000624796 1859 ntBASIC3.64□□□□□ -1.83
AP1S3Q96PC3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AP1S3Q96PC3 AC017104.4-201ENST00000636283 1592 ntBASIC3.63□□□□□ -1.83
AP1S3Q96PC3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
AP1S3Q96PC3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms