Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AP000580.1-201ENST00000404439 358 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 SNORA81-201ENST00000408493 178 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 SNORA79B-201ENST00000410557 148 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL591623.2-201ENST00000449978 222 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL445433.1-201ENST00000457507 257 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 RN7SL517P-201ENST00000462240 305 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 RN7SL591P-201ENST00000496150 292 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 BTG4P1-201ENST00000510421 183 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 RFPL4AP3-201ENST00000515267 345 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 MIR4436B2-201ENST00000581415 91 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 MIR4436B1-201ENST00000583272 91 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 Mico1.1-201ENST00000611698 204 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL049539.1-201ENST00000611964 459 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AL049794.2-201ENST00000616301 365 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 AC021242.1-201ENST00000507315 2035 ntBASIC5.01□□□□□ -1.61
C9orf72Q96LT7 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
C9orf72Q96LT7 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 AL034370.1-201ENST00000397254 1590 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 ECM1P2-201ENST00000503354 1577 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 AL589994.1-201ENST00000404962 340 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5□□□□□ -1.61
C9orf72Q96LT7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5□□□□□ -1.61
C9orf72Q96LT7 RPS26P13-201ENST00000419030 330 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 DDX39BP1-205ENST00000422507 192 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AL034379.1-201ENST00000423216 253 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 NMNAT1P2-201ENST00000435192 860 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 AL772161.1-201ENST00000439130 476 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AL354714.3-201ENST00000447284 493 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 RNA5SP464-201ENST00000516251 108 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AP001922.4-201ENST00000526967 290 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5□□□□□ -1.61
C9orf72Q96LT7 MTND2P17-201ENST00000550281 688 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 EIF1P5-201ENST00000585002 234 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5□□□□□ -1.61
C9orf72Q96LT7 AC105254.2-201ENST00000603636 436 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC093799.2-201ENST00000610062 578 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 EIF3FP1-201ENST00000613970 806 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5□□□□□ -1.61
C9orf72Q96LT7 AC015804.1-201ENST00000622935 435 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AC087821.1-201ENST00000623639 567 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5□□□□□ -1.61
C9orf72Q96LT7 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5□□□□□ -1.61
C9orf72Q96LT7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
C9orf72Q96LT7 AL513548.1-201ENST00000562904 1724 ntBASIC5□□□□□ -1.61
C9orf72Q96LT7 AP000542.2-201ENST00000623199 6179 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 SNORA66-201ENST00000384792 133 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 SMC4P1-201ENST00000414479 527 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 E2F6P2-201ENST00000420708 748 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
C9orf72Q96LT7 PA2G4P6-201ENST00000438325 1197 ntBASIC4.99□□□□□ -1.61
C9orf72Q96LT7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms