Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC009779.8-202ENST00000607990 932 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 FRG1DP-201ENST00000635586 771 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 MIR193BHG-214ENST00000641765 509 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC091305.2-201ENST00000624049 1576 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC011447.7-201ENST00000624228 1590 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC063976.2-201ENST00000425667 3556 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AC023421.1-201ENST00000590535 1785 ntBASIC5.06□□□□□ -1.6
VPS33AQ96AX1 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
VPS33AQ96AX1 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AP000542.2-201ENST00000623199 6179 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 RNU4-2-201ENST00000365668 141 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC007738.1-201ENST00000413892 348 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC093155.2-201ENST00000420734 937 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 RPS24P8-201ENST00000431490 402 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 GTF3AP5-201ENST00000442645 697 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC017099.1-201ENST00000448261 1028 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC008115.3-201ENST00000614874 549 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AP000648.2-201ENST00000624182 404 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC068446.1-201ENST00000556425 1549 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 AC100778.3-201ENST00000580060 1750 ntBASIC5.05□□□□□ -1.6
VPS33AQ96AX1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
VPS33AQ96AX1 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 RNU6-252P-201ENST00000363232 107 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 OR4K12P-201ENST00000406538 961 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 RNU6-603P-201ENST00000411403 107 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC104333.2-201ENST00000422630 192 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL390879.2-203ENST00000426943 1121 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 PTP4A1P3-201ENST00000433661 420 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 SUMO2P3-201ENST00000438311 288 ntBASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.04□□□□□ -1.6
VPS33AQ96AX1 AL445665.1-202ENST00000452436 324 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms