Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 ZNF733P-202ENST00000444809 1573 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 ECM1P2-201ENST00000503354 1577 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 MIR600-201ENST00000385007 98 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 VN1R37P-201ENST00000419096 748 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 OR2X1P-201ENST00000421144 687 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 PDSS1P1-201ENST00000422953 1114 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 SCAND3P1-201ENST00000439854 1060 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 TDGF1P1-201ENST00000445734 527 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AL645937.3-201ENST00000453647 936 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC135999.1-201ENST00000478962 479 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC079841.1-201ENST00000481228 950 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC093763.2-201ENST00000505334 1223 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC134349.2-201ENST00000535136 910 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC007066.2-202ENST00000566531 914 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC069307.1-201ENST00000602820 447 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 RPL26P30-202ENST00000602923 645 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AL451049.1-201ENST00000608672 497 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 MIR7155-201ENST00000615925 56 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AF117829.2-201ENST00000619538 361 ntBASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CCDC112Q8NEF3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC109780.1-201ENST00000451768 1344 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 SNORA58B-201ENST00000364259 136 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 RPS24P12-201ENST00000402084 394 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 RN7SKP213-201ENST00000410746 298 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC007394.1-201ENST00000421941 531 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC006455.6-201ENST00000426192 893 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 PTMAP6-201ENST00000439110 327 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC104651.2-201ENST00000447549 528 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC090589.1-201ENST00000473109 362 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 RN7SL41P-201ENST00000476144 297 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 RPS21P4-201ENST00000487122 248 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC022832.1-201ENST00000530718 645 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 HMGN2P6-201ENST00000551091 273 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 COX6CP4-201ENST00000605798 228 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AL359513.1-201ENST00000614364 557 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC009237.17-201ENST00000618111 748 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 AC015804.1-201ENST00000622935 435 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 EOGT-210ENST00000615922 1931 ntBASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CCDC112Q8NEF3 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.56
CCDC112Q8NEF3 HCFC2P1-201ENST00000392864 1592 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC073429.2-201ENST00000569694 1444 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 MIR921-201ENST00000401133 56 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 RN7SKP114-201ENST00000410327 279 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 DPPA2P3-201ENST00000411853 655 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AL390774.1-201ENST00000411924 246 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 EIF4EP1-201ENST00000422311 642 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 CNOT7P2-201ENST00000441051 832 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 RN7SL329P-201ENST00000467740 299 ntBASIC5.33□□□□□ -1.56
CCDC112Q8NEF3 AC015864.1-201ENST00000496512 544 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms