Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RNU6-374P-201ENST00000364146 108 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ARSFP1-201ENST00000398758 477 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ZNF603P-201ENST00000405613 487 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL596448.1-201ENST00000415024 392 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC104651.1-201ENST00000427559 735 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RPL23AP19-201ENST00000436229 369 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RPL5P10-201ENST00000445207 894 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL603882.1-201ENST00000463059 681 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RPS3AP49-201ENST00000472161 790 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RPL7AP23-201ENST00000482625 776 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 PDCL3P4-201ENST00000489621 720 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC091849.1-201ENST00000509920 121 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 GTF2F2P1-201ENST00000511083 675 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 MTCO1P30-201ENST00000515244 580 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 NPM1P6-201ENST00000521088 871 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 CHEK2P2-201ENST00000554701 672 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC068135.2-201ENST00000569293 1028 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC004232.1-201ENST00000571388 208 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC090616.1-201ENST00000583895 447 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RPL7AP69-201ENST00000595306 806 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL390816.3-201ENST00000604527 1066 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC109347.2-201ENST00000610220 349 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 MIR7973-1-201ENST00000614683 76 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 U1.41-201ENST00000617626 165 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC005899.6-201ENST00000620729 297 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC005514.1-201ENST00000623521 208 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 CDR1-202ENST00000625883 1485 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC062022.1-201ENST00000451026 1684 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AC110373.1-201ENST00000505994 3505 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PHC3Q8NDX5 AL079343.1-201ENST00000572358 1771 ntBASIC6.57□□□□□ -1.36
PHC3Q8NDX5 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 RPL24P4-201ENST00000326586 421 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 RPL21P132-201ENST00000331267 462 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 RNU6-501P-201ENST00000364072 100 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 AL359694.1-201ENST00000403247 604 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 AL133264.1-201ENST00000407157 562 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 MIR1266-201ENST00000408125 84 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 RN7SKP296-201ENST00000411185 341 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 MTND1P21-201ENST00000412991 285 ntBASIC6.56□□□□□ -1.36
PHC3Q8NDX5 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.56□□□□□ -1.36
PHC3Q8NDX5 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms