Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AP001153.1-201ENST00000641024 338 ntBASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SMC1BQ8NDV3 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 MFSD8-216ENST00000641147 4009 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 RNU1-149P-201ENST00000390870 161 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC019050.1-201ENST00000418508 492 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AL034379.1-201ENST00000423216 253 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 OSTCP5-201ENST00000425293 453 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC008072.1-201ENST00000434254 824 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 MTCO2P20-201ENST00000437339 673 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC091180.1-201ENST00000462104 372 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 RN7SL165P-201ENST00000477476 291 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 CR383656.1-201ENST00000484916 377 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 RNU6-941P-201ENST00000516346 108 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 OR10V3P-201ENST00000525712 725 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 BNIP3P5-201ENST00000562290 498 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AP001357.1-201ENST00000586304 1053 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AL365400.2-201ENST00000605604 902 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AC087385.3-201ENST00000620477 187 ntBASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMC1BQ8NDV3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC092724.1-201ENST00000624623 3397 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 RN7SKP149-201ENST00000363008 344 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 RPL12P28-201ENST00000430852 489 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 NDUFA5P10-201ENST00000432147 357 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 NANOGP9-201ENST00000439890 892 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 MTCYBP12-201ENST00000440559 1134 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC069540.1-201ENST00000446320 988 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 TRY2P-201ENST00000448860 689 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 Z95152.1-201ENST00000453556 656 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC092155.2-201ENST00000454675 477 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC093815.1-201ENST00000508637 280 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC112673.1-201ENST00000513168 575 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AP001636.2-201ENST00000525517 696 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AL049830.4-201ENST00000555149 351 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC090888.2-201ENST00000559765 1144 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC002487.1-201ENST00000604565 994 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC068831.8-201ENST00000620171 435 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 AC092451.3-201ENST00000625067 1343 ntBASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMC1BQ8NDV3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
SMC1BQ8NDV3 IQCB2P-201ENST00000401788 1633 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms