Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ZNF439Q8NDP4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
ZNF439Q8NDP4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MAPK10-349ENST00000641767 3661 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 SCARNA15-201ENST00000607520 4325 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC107068.1-201ENST00000563286 4218 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RPL23P2-201ENST00000320371 421 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RPS18P6-201ENST00000476880 458 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RN7SL727P-201ENST00000482164 296 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RNA5SP303-201ENST00000516192 130 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RNA5SP228-201ENST00000516232 133 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC027308.1-201ENST00000517993 110 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 NPM1P6-201ENST00000521088 871 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC092490.3-201ENST00000545370 572 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MIR4691-201ENST00000583764 85 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MIR6862-1-201ENST00000613016 70 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MIR6862-2-201ENST00000614755 70 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AL049794.2-201ENST00000616301 365 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 RLIMP2-201ENST00000427891 1563 ntBASIC4.06□□□□□ -1.76
ZNF439Q8NDP4 MTCO1P11-201ENST00000429111 1528 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 RNU1-106P-201ENST00000384382 164 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 Z68694.1-201ENST00000413929 841 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 TMBIM7P-201ENST00000418074 855 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AL355433.1-201ENST00000422804 300 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 GYG1P1-201ENST00000460864 698 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 RN7SL244P-201ENST00000493405 297 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC026688.1-201ENST00000520639 1168 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC006116.3-201ENST00000592968 361 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC233280.2-201ENST00000603917 1070 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC087783.2-201ENST00000605070 562 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC087821.1-201ENST00000623639 567 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 AC112255.1-201ENST00000624070 2493 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 Z95327.2-201ENST00000414579 1873 ntBASIC4.05□□□□□ -1.76
ZNF439Q8NDP4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF439Q8NDP4 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF439Q8NDP4 AC009643.2-201ENST00000603543 1448 ntBASIC4.04□□□□□ -1.76
ZNF439Q8NDP4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
ZNF439Q8NDP4 AC092435.4-201ENST00000623012 4159 ntBASIC4.04□□□□□ -1.76
ZNF439Q8NDP4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms