Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 HMGB1P38-201ENST00000490557 577 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 SNRPCP2-201ENST00000504370 475 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 RPS4XP20-201ENST00000505751 772 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 SCARNA20.4-201ENST00000516969 131 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 RNA5SP373-201ENST00000517271 95 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 EEF1A1P37-201ENST00000522748 715 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 NPM1P35-201ENST00000533043 868 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AL132657.2-201ENST00000564417 358 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 MIR4509-3-201ENST00000578671 94 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 MIR4509-2-201ENST00000583920 94 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AF230666.2-201ENST00000602328 725 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 MIR4509-1-201ENST00000618224 94 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC090617.9-201ENST00000623751 147 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC109780.1-201ENST00000451768 1344 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 AC100757.1-201ENST00000616872 1835 ntBASIC5.64□□□□□ -1.51
VSTM1Q6UX27 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
VSTM1Q6UX27 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 PPIAP9-201ENST00000403866 498 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC096533.1-201ENST00000411645 353 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC006994.1-201ENST00000438212 839 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 RAB28P3-201ENST00000448325 597 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC090804.1-201ENST00000448870 490 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AURKAPS1-201ENST00000451805 1212 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 OR52E3P-201ENST00000452083 936 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC104849.1-201ENST00000462623 405 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC008410.1-201ENST00000483777 339 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC005412.2-201ENST00000492004 341 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 RPL15P21-201ENST00000495592 567 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 OR5H3P-201ENST00000502817 919 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC093720.1-201ENST00000505681 714 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 SNORA19.3-201ENST00000516165 130 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 OR8G5-201ENST00000524943 1041 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC118942.1-201ENST00000529674 1035 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 OR8G3P-201ENST00000533406 921 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC125612.1-201ENST00000547580 377 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC015849.2-201ENST00000605738 409 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AL139407.1-201ENST00000613826 1175 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC078880.5-201ENST00000617845 421 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AP002505.2-201ENST00000623585 696 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC138965.3-201ENST00000623875 498 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC004777.1-201ENST00000624317 287 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AP003400.3-201ENST00000624904 346 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
VSTM1Q6UX27 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VSTM1Q6UX27 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.62□□□□□ -1.51
VSTM1Q6UX27 AL353796.1-201ENST00000561542 3241 ntBASIC5.62□□□□□ -1.51
VSTM1Q6UX27 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VSTM1Q6UX27 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms