Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 PPIAP13-201ENST00000434706 478 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 TRIM60P16-201ENST00000444048 694 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC099063.2-201ENST00000446360 662 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC069304.1-201ENST00000491593 704 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 MTCYBP35-201ENST00000503630 1137 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 CR383658.1-201ENST00000514609 734 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 RN7SKP288-201ENST00000516227 268 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC008562.1-201ENST00000521763 330 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 MTND2P38-201ENST00000522536 667 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 DUXAP5-201ENST00000529668 529 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC023538.1-201ENST00000534576 736 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC023050.2-201ENST00000544968 387 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 VN1R83P-201ENST00000595685 445 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 WBP1LP12-201ENST00000604449 331 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC018926.3-201ENST00000618841 406 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AP000484.1-201ENST00000620067 1252 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AP002967.1-201ENST00000624203 539 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 CDRT1-208ENST00000630868 794 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RNF220Q5VTB9 AC025263.3-201ENST00000622965 1396 ntBASIC5.55□□□□□ -1.52
RNF220Q5VTB9 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 GVINP1-202ENST00000531871 7271 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 SNORA51.12-201ENST00000384448 134 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 FCF1P5-201ENST00000406490 482 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AL133482.1-201ENST00000415988 498 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 VPS26BP1-201ENST00000417155 755 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC005005.2-201ENST00000420779 380 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RPL7AP51-201ENST00000422016 760 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RPL7P4-203ENST00000430239 730 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 DEFA9P-201ENST00000433042 285 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MTCYBP31-201ENST00000438855 1122 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 NANOGP9-201ENST00000439890 892 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC007383.1-201ENST00000445875 636 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 ZNF619P1-201ENST00000446539 752 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 PTENP1-201ENST00000447117 1215 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC097359.1-201ENST00000447946 463 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 MRPL42P4-201ENST00000453267 443 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 RPL37P3-201ENST00000456825 293 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.54□□□□□ -1.52
RNF220Q5VTB9 PRDX3P4-201ENST00000470828 747 ntBASIC5.54□□□□□ -1.52
RNF220Q5VTB9 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms