Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 PABPC1P8-201ENST00000452851 2086 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 RNA5SP366-201ENST00000365454 123 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 MIR659-201ENST00000384963 97 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 SNORA48.4-201ENST00000391089 134 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 TMA16P2-201ENST00000413187 601 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 NDUFA5P1-201ENST00000433858 341 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 LINC02210-201ENST00000444561 288 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 RPL17P2-201ENST00000491913 451 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 VN1R92P-201ENST00000598511 928 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 AC084757.4-201ENST00000616350 526 ntBASIC4.67□□□□□ -1.66
RIF1Q5UIP0 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RIF1Q5UIP0 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL158152.1-201ENST00000602652 1435 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC025574.1-201ENST00000554784 1653 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 BX323845.1-201ENST00000432417 179 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 GOT2P5-201ENST00000433995 546 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 TCEA1P3-201ENST00000443005 880 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL049839.1-201ENST00000556151 657 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 MIR4286-201ENST00000580651 93 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC007342.8-201ENST00000623278 678 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 OR56B2P-202ENST00000641377 2453 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 STX3-208ENST00000641815 3236 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 SALL4P2-201ENST00000423288 2910 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL500522.2-201ENST00000448562 343 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 RN7SL810P-201ENST00000493031 276 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 OR2A3P-201ENST00000493774 953 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC016550.3-201ENST00000515706 767 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 AC100847.1-201ENST00000611316 481 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RIF1Q5UIP0 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.66□□□□□ -1.66
RIF1Q5UIP0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL590704.1-201ENST00000402856 794 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 EIF4A1P3-201ENST00000411521 244 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 FTH1P10-202ENST00000430907 550 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL132838.2-201ENST00000492041 314 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 MIR8059-201ENST00000620427 81 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AL357559.1-201ENST00000622228 274 ntBASIC4.65□□□□□ -1.66
RIF1Q5UIP0 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RIF1Q5UIP0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RIF1Q5UIP0 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms