Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC083843.3-201ENST00000623679 2186 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 MTND5P11-201ENST00000511037 1812 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN1BQ07699 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SCN1BQ07699 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 AL159987.1-201ENST00000347911 293 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 SUGT1P2-201ENST00000379452 992 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RNU6-1005P-201ENST00000384519 107 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RNU6-796P-201ENST00000391086 107 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RN7SKP125-201ENST00000410481 302 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RMRPP5-201ENST00000411156 267 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC019070.1-201ENST00000415008 1024 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 OR13Z1P-201ENST00000416141 834 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AK4P4-201ENST00000419465 646 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AL121882.1-201ENST00000422893 417 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 RPL17P35-201ENST00000432217 549 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AL596266.1-201ENST00000448132 400 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC017099.1-201ENST00000448261 1028 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 TPMTP4-201ENST00000450749 678 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.77□□□□□ -1.65
SCN1BQ07699 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 RN7SL205P-201ENST00000490174 284 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 LSM3P4-201ENST00000502948 309 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC025458.1-201ENST00000506046 166 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN1BQ07699 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.77□□□□□ -1.65
SCN1BQ07699 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 POLR2KP1-201ENST00000553226 168 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC079148.1-201ENST00000565944 819 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC092121.1-201ENST00000569452 202 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC011840.5-201ENST00000582125 771 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AF230666.2-201ENST00000602328 725 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AP003117.1-201ENST00000602771 554 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC079880.2-201ENST00000603790 1213 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC009027.1-201ENST00000604510 479 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC007423.1-201ENST00000605009 627 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC009779.8-202ENST00000607990 932 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AC100847.1-201ENST00000611316 481 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 AC015914.2-201ENST00000618167 288 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 BX005214.3-202ENST00000619809 325 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 OR8G3P-202ENST00000641572 1255 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SCN1BQ07699 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 MAPK10-320ENST00000641462 6696 ntBASIC4.77□□□□□ -1.65
SCN1BQ07699 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.77□□□□□ -1.65
SCN1BQ07699 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCN1BQ07699 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SCN1BQ07699 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SCN1BQ07699 METTL21EP-201ENST00000298105 713 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 RNU1-19P-201ENST00000363306 165 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 RNA5SP433-201ENST00000364491 114 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AL590290.1-201ENST00000405336 380 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 TCEA1P4-201ENST00000415066 844 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 MARK2P12-201ENST00000420129 585 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC023128.2-201ENST00000420880 1223 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 RPL36AP10-201ENST00000421785 322 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 PNRC2P1-201ENST00000423940 420 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC073069.1-201ENST00000428657 441 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN1BQ07699 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCN1BQ07699 AC092685.1-201ENST00000447960 1243 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AL358876.1-201ENST00000453364 1075 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.76□□□□□ -1.65
SCN1BQ07699 MTND6P6-201ENST00000478031 263 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AP002884.1-201ENST00000479691 655 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 AC009120.1-201ENST00000493458 473 ntBASIC4.76□□□□□ -1.65
SCN1BQ07699 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms