Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.22□□□□□ -1.57
RAE1P78406 OR5AK3P-201ENST00000527486 1297 ntBASIC5.22□□□□□ -1.57
RAE1P78406 OR4A43P-201ENST00000532938 908 ntBASIC5.22□□□□□ -1.57
RAE1P78406 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.22□□□□□ -1.57
RAE1P78406 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAE1P78406 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.22□□□□□ -1.57
RAE1P78406 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.22□□□□□ -1.57
RAE1P78406 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.22□□□□□ -1.57
RAE1P78406 AC006518.2-201ENST00000542513 940 ntBASIC5.22□□□□□ -1.57
RAE1P78406 AC091515.1-201ENST00000548110 679 ntBASIC5.22□□□□□ -1.57
RAE1P78406 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.22□□□□□ -1.57
RAE1P78406 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.22□□□□□ -1.57
RAE1P78406 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RAE1P78406 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.22□□□□□ -1.57
RAE1P78406 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.22□□□□□ -1.57
RAE1P78406 AC011472.4-201ENST00000615848 491 ntBASIC5.22□□□□□ -1.57
RAE1P78406 AC013470.4-201ENST00000619978 986 ntBASIC5.22□□□□□ -1.57
RAE1P78406 AP002967.1-201ENST00000624203 539 ntBASIC5.22□□□□□ -1.57
RAE1P78406 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.22□□□□□ -1.57
RAE1P78406 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RAE1P78406 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAE1P78406 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RAE1P78406 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RAE1P78406 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RAE1P78406 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
RAE1P78406 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RAE1P78406 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RAE1P78406 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RAE1P78406 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RAE1P78406 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RAE1P78406 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
RAE1P78406 ABCC13-202ENST00000463099 3842 ntBASIC5.21□□□□□ -1.57
RAE1P78406 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 RN7SKP6-201ENST00000364795 319 ntBASIC5.21□□□□□ -1.58
RAE1P78406 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 RNU6-224P-201ENST00000384055 107 ntBASIC5.21□□□□□ -1.58
RAE1P78406 MIR551A-201ENST00000385042 96 ntBASIC5.21□□□□□ -1.58
RAE1P78406 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAE1P78406 AL136310.1-201ENST00000404926 654 ntBASIC5.21□□□□□ -1.58
RAE1P78406 VTA1P1-201ENST00000414044 866 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.21□□□□□ -1.58
RAE1P78406 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 HIGD1AP4-201ENST00000430194 280 ntBASIC5.21□□□□□ -1.58
RAE1P78406 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 MTCO1P52-201ENST00000433928 531 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AL592437.1-201ENST00000443781 492 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.21□□□□□ -1.58
RAE1P78406 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 IGBP1P4-201ENST00000503202 879 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 SNORD46.2-201ENST00000516021 102 ntBASIC5.21□□□□□ -1.58
RAE1P78406 RN7SKP70-201ENST00000516655 271 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.21□□□□□ -1.58
RAE1P78406 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 AC012616.1-201ENST00000600294 197 ntBASIC5.21□□□□□ -1.58
RAE1P78406 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.21□□□□□ -1.58
RAE1P78406 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 AL138478.1-201ENST00000612252 832 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AL118522.2-201ENST00000616045 615 ntBASIC5.21□□□□□ -1.58
RAE1P78406 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 AP002782.1-201ENST00000623107 614 ntBASIC5.21□□□□□ -1.58
RAE1P78406 MIR1910-201ENST00000636955 80 ntBASIC5.21□□□□□ -1.58
RAE1P78406 LINC01808-202ENST00000641680 1116 ntBASIC5.21□□□□□ -1.58
RAE1P78406 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
RAE1P78406 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.21□□□□□ -1.58
RAE1P78406 CDC27P2-201ENST00000425026 1922 ntBASIC5.21□□□□□ -1.58
RAE1P78406 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
RAE1P78406 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RAE1P78406 AL442128.2-201ENST00000620246 1824 ntBASIC5.2□□□□□ -1.58
RAE1P78406 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RAE1P78406 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.2□□□□□ -1.58
RAE1P78406 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.2□□□□□ -1.58
RAE1P78406 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms