Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 HYALP1-201ENST00000417674 1279 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.53□□□□□ -1.52
HDAC4P56524 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.53□□□□□ -1.52
HDAC4P56524 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 SPRYD7P1-201ENST00000443861 570 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 RPL7L1P1-201ENST00000448259 785 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 HSPE1P22-201ENST00000456856 327 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC011225.1-201ENST00000457751 369 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 RPL7P6-201ENST00000480903 738 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 RPS24P16-201ENST00000497294 392 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 SNORA76.2-201ENST00000517095 137 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC103833.1-201ENST00000517442 172 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 VTA1P2-201ENST00000520205 911 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 AC087888.1-201ENST00000550884 1254 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 NMNAT1P5-201ENST00000559657 841 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC093510.2-201ENST00000562820 896 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HDAC4P56524 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HDAC4P56524 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 MTCO2P22-201ENST00000603246 681 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC005252.1-201ENST00000604518 1063 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AL139022.2-201ENST00000606934 443 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC110792.4-201ENST00000609843 298 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AC016769.4-201ENST00000616893 535 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.53□□□□□ -1.52
HDAC4P56524 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 RBPJP2-201ENST00000618187 1444 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 AL606537.1-201ENST00000607258 2011 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
HDAC4P56524 AL034549.2-201ENST00000618285 3373 ntBASIC5.53□□□□□ -1.52
HDAC4P56524 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
HDAC4P56524 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
HDAC4P56524 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.53□□□□□ -1.52
HDAC4P56524 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
HDAC4P56524 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.52□□□□□ -1.53
HDAC4P56524 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC4P56524 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 U3.7-201ENST00000363668 216 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC4P56524 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.52□□□□□ -1.53
HDAC4P56524 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 RN7SKP59-201ENST00000410520 314 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 CFL1P1-202ENST00000432948 411 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 ELOCP3-201ENST00000439303 348 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC079168.1-201ENST00000458741 345 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AL133445.1-201ENST00000467051 452 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC020779.1-201ENST00000478757 796 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 SIAH1P1-201ENST00000479411 923 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 NPM1P29-201ENST00000483112 803 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 RPL7P41-201ENST00000485823 957 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 AC108043.1-201ENST00000512696 574 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 AC022360.1-201ENST00000521058 340 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 AP002373.2-201ENST00000541631 1060 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 AC106730.2-201ENST00000566641 540 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 FKBP1AP1-201ENST00000594588 318 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.52□□□□□ -1.53
HDAC4P56524 ZNF92P2-201ENST00000600543 1059 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AL162431.4-201ENST00000604674 411 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC004775.1-201ENST00000607389 753 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC005021.1-201ENST00000608730 355 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC004948.1-201ENST00000609858 672 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC022306.3-201ENST00000619930 550 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 AC006840.1-201ENST00000623069 542 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 7.4 ms