Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CDH11P55287 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CDH11P55287 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.81□□□□□ -1.64
CDH11P55287 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDH11P55287 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDH11P55287 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.81□□□□□ -1.64
CDH11P55287 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CDH11P55287 GCNT6-201ENST00000379591 934 ntBASIC4.81□□□□□ -1.64
CDH11P55287 GSTA12P-201ENST00000402398 508 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AL355143.1-201ENST00000407101 841 ntBASIC4.81□□□□□ -1.64
CDH11P55287 MIR1286-201ENST00000408112 78 ntBASIC4.81□□□□□ -1.64
CDH11P55287 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 AL512637.2-201ENST00000431287 1256 ntBASIC4.81□□□□□ -1.64
CDH11P55287 CYCSP6-201ENST00000434498 302 ntBASIC4.81□□□□□ -1.64
CDH11P55287 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 AC239798.3-201ENST00000454459 408 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 AC011225.1-201ENST00000457751 369 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AC092691.2-201ENST00000461787 803 ntBASIC4.81□□□□□ -1.64
CDH11P55287 RPL7P41-201ENST00000485823 957 ntBASIC4.81□□□□□ -1.64
CDH11P55287 UBA52P7-201ENST00000486088 380 ntBASIC4.81□□□□□ -1.64
CDH11P55287 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 CAB39P1-201ENST00000502277 460 ntBASIC4.81□□□□□ -1.64
CDH11P55287 MTCO2P9-201ENST00000503214 694 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.81□□□□□ -1.64
CDH11P55287 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 AC112198.4-201ENST00000515450 351 ntBASIC4.81□□□□□ -1.64
CDH11P55287 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 LSM3P2-201ENST00000551246 273 ntBASIC4.81□□□□□ -1.64
CDH11P55287 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.81□□□□□ -1.64
CDH11P55287 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 MIR1269B-201ENST00000580405 75 ntBASIC4.81□□□□□ -1.64
CDH11P55287 FAM106CP-201ENST00000582212 507 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 BNIP3P31-201ENST00000604515 566 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AC015849.2-201ENST00000605738 409 ntBASIC4.81□□□□□ -1.64
CDH11P55287 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.81□□□□□ -1.64
CDH11P55287 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CDH11P55287 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.81□□□□□ -1.64
CDH11P55287 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CDH11P55287 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 THAP12P5-201ENST00000405864 2275 ntBASIC4.8□□□□□ -1.64
CDH11P55287 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 C4BPAP1-201ENST00000415474 1893 ntBASIC4.8□□□□□ -1.64
CDH11P55287 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH11P55287 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.8□□□□□ -1.64
CDH11P55287 RNU6-171P-201ENST00000384354 107 ntBASIC4.8□□□□□ -1.64
CDH11P55287 RNU1-77P-201ENST00000390868 162 ntBASIC4.8□□□□□ -1.64
CDH11P55287 RPL35AP24-201ENST00000413846 330 ntBASIC4.8□□□□□ -1.64
CDH11P55287 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
CDH11P55287 BMS1P13-201ENST00000417301 885 ntBASIC4.8□□□□□ -1.64
CDH11P55287 CYCSP12-201ENST00000437729 300 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 CBX1P5-201ENST00000475330 559 ntBASIC4.8□□□□□ -1.64
CDH11P55287 RN7SL799P-201ENST00000475891 298 ntBASIC4.8□□□□□ -1.64
CDH11P55287 NPM1P17-201ENST00000479221 602 ntBASIC4.8□□□□□ -1.64
CDH11P55287 RN7SL814P-201ENST00000487715 300 ntBASIC4.8□□□□□ -1.64
CDH11P55287 SUMO1P1-201ENST00000497904 306 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH11P55287 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH11P55287 AC021146.7-201ENST00000509604 775 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH11P55287 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms