Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
GTF2A1P52655 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
GTF2A1P52655 U3.2-201ENST00000362981 210 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 RNA5SP394-201ENST00000364216 119 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 HMGB1P20-201ENST00000402555 677 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 MIR1275-201ENST00000408770 80 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 RPL6P21-201ENST00000418672 846 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.71□□□□□ -1.66
GTF2A1P52655 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.71□□□□□ -1.66
GTF2A1P52655 PRPF38AP2-201ENST00000438179 851 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 MTND6P5-201ENST00000448266 512 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 MTND2P25-201ENST00000449028 610 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 RPL21P71-201ENST00000465598 459 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AC025458.1-201ENST00000506046 166 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 MTND6P2-201ENST00000512226 524 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AK6-204ENST00000512561 587 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 RNU6-615P-201ENST00000516065 106 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 Vault.2-201ENST00000516519 98 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 SNORA70.20-201ENST00000516848 126 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AP004607.2-201ENST00000533949 322 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.71□□□□□ -1.66
GTF2A1P52655 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.71□□□□□ -1.66
GTF2A1P52655 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.71□□□□□ -1.66
GTF2A1P52655 OR11J2P-201ENST00000555298 907 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.71□□□□□ -1.66
GTF2A1P52655 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.71□□□□□ -1.66
GTF2A1P52655 MRPS21P7-201ENST00000566937 238 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 RN7SL356P-201ENST00000582228 248 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 AL162431.4-201ENST00000604674 411 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 HTR1DP1-201ENST00000616500 888 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 AL035461.2-201ENST00000619201 524 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 MIR6813-201ENST00000621638 56 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
GTF2A1P52655 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.71□□□□□ -1.66
GTF2A1P52655 AC114786.1-201ENST00000512892 1415 ntBASIC4.71□□□□□ -1.66
GTF2A1P52655 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF2A1P52655 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 AC067945.1-201ENST00000342609 618 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 MIR921-201ENST00000401133 56 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 GAPDHP42-201ENST00000406848 981 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 RN7SKP126-201ENST00000411143 300 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC245060.4-201ENST00000413293 1121 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.7□□□□□ -1.66
GTF2A1P52655 BTG3P1-201ENST00000435859 716 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC004938.1-201ENST00000438468 308 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 TIMM8BP2-201ENST00000445940 251 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 EEF1B2P3-201ENST00000447718 678 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC058823.1-201ENST00000485315 474 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
GTF2A1P52655 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.7□□□□□ -1.66
GTF2A1P52655 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.7□□□□□ -1.66
GTF2A1P52655 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF2A1P52655 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.7□□□□□ -1.66
GTF2A1P52655 AGGF1P8-201ENST00000562979 1000 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC092121.1-201ENST00000569452 202 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC009597.2-201ENST00000604659 592 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC090948.2-201ENST00000607363 564 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF2A1P52655 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF2A1P52655 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.7□□□□□ -1.66
GTF2A1P52655 CASC19-274ENST00000642018 970 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 AC008691.1-209ENST00000642094 814 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
GTF2A1P52655 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.7□□□□□ -1.66
GTF2A1P52655 AC097504.1-201ENST00000515103 2415 ntBASIC4.7□□□□□ -1.66
GTF2A1P52655 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
GTF2A1P52655 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.69□□□□□ -1.66
GTF2A1P52655 RNA5SP239-201ENST00000410218 129 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.69□□□□□ -1.66
GTF2A1P52655 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AL391987.1-201ENST00000441025 200 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 AC005297.1-201ENST00000444765 862 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.69□□□□□ -1.66
GTF2A1P52655 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
GTF2A1P52655 AL645939.1-201ENST00000453429 797 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 ACA64.1-201ENST00000459171 127 ntBASIC4.69□□□□□ -1.66
GTF2A1P52655 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.69□□□□□ -1.66
GTF2A1P52655 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms