Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 RNU6-40P-201ENST00000384254 107 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AL021331.1-201ENST00000402817 582 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 RPL12P9-201ENST00000412942 488 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 MTND2P9-201ENST00000422293 931 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 AC023141.6-201ENST00000429418 337 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCN3P51790 ZNF965P-201ENST00000432501 817 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AP000949.1-201ENST00000438328 629 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 RPS29P9-201ENST00000440360 171 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCN3P51790 OR52J1P-201ENST00000450596 932 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC239798.3-201ENST00000454459 408 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCN3P51790 MTND2P30-201ENST00000456663 382 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC005412.2-201ENST00000492004 341 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 AC002456.2-201ENST00000509356 380 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC098976.1-201ENST00000513014 541 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 CR383656.14-201ENST00000551951 406 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCN3P51790 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC5.53□□□□□ -1.52
CLCN3P51790 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 AL355802.4-201ENST00000607635 548 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.53□□□□□ -1.52
CLCN3P51790 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 HSPA8P14-201ENST00000552265 1805 ntBASIC5.53□□□□□ -1.52
CLCN3P51790 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CLCN3P51790 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CLCN3P51790 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 AC109446.4-201ENST00000623235 2755 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 RNA5SP191-201ENST00000362585 102 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 SNORD115-48-201ENST00000364764 76 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
CLCN3P51790 CYB5AP4-201ENST00000396692 399 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 ATP5HP3-201ENST00000396994 486 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 RPL10P10-201ENST00000403509 664 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCN3P51790 RPA2P2-201ENST00000419698 796 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 MTND4P24-201ENST00000424002 397 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 FABP7P2-201ENST00000429946 379 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 RPS26P4-201ENST00000431743 355 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCN3P51790 AL590762.3-201ENST00000436372 640 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC007686.1-201ENST00000488511 463 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC106806.2-201ENST00000509365 500 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AC025768.1-201ENST00000510057 267 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AC093770.1-201ENST00000511559 571 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 RNA5SP228-201ENST00000516232 133 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC027369.5-201ENST00000533838 755 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AP000619.2-201ENST00000546014 969 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCN3P51790 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 BGLT3-201ENST00000564523 994 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.52□□□□□ -1.53
CLCN3P51790 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms