Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CENPAP49450 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CENPAP49450 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.08□□□□□ -1.6
CENPAP49450 AL451142.2-201ENST00000429076 2090 ntBASIC5.08□□□□□ -1.6
CENPAP49450 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 SNORA70.6-201ENST00000383934 134 ntBASIC5.07□□□□□ -1.6
CENPAP49450 RNU4-31P-201ENST00000384211 141 ntBASIC5.07□□□□□ -1.6
CENPAP49450 MIR130A-201ENST00000385274 89 ntBASIC5.07□□□□□ -1.6
CENPAP49450 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CENPAP49450 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC099535.1-201ENST00000408928 371 ntBASIC5.07□□□□□ -1.6
CENPAP49450 RPS6P23-201ENST00000413224 722 ntBASIC5.07□□□□□ -1.6
CENPAP49450 Z68694.1-201ENST00000413929 841 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 EIF4A1P1-201ENST00000420241 934 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC023128.2-201ENST00000420880 1223 ntBASIC5.07□□□□□ -1.6
CENPAP49450 BX284632.2-201ENST00000421091 399 ntBASIC5.07□□□□□ -1.6
CENPAP49450 RIMKLBP2-201ENST00000424737 654 ntBASIC5.07□□□□□ -1.6
CENPAP49450 ARF4P4-201ENST00000439608 520 ntBASIC5.07□□□□□ -1.6
CENPAP49450 YWHAZP2-201ENST00000440317 728 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AL512605.1-202ENST00000441919 381 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC097499.1-201ENST00000444277 208 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AL359955.2-201ENST00000445380 353 ntBASIC5.07□□□□□ -1.6
CENPAP49450 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 AC243772.1-201ENST00000451620 410 ntBASIC5.07□□□□□ -1.6
CENPAP49450 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 AC008280.2-201ENST00000455473 307 ntBASIC5.07□□□□□ -1.6
CENPAP49450 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.07□□□□□ -1.6
CENPAP49450 RPS17P15-201ENST00000475609 349 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC117394.1-201ENST00000477323 567 ntBASIC5.07□□□□□ -1.6
CENPAP49450 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 EIF3LP3-201ENST00000495197 822 ntBASIC5.07□□□□□ -1.6
CENPAP49450 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.07□□□□□ -1.6
CENPAP49450 AC138866.2-201ENST00000508650 584 ntBASIC5.07□□□□□ -1.6
CENPAP49450 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.07□□□□□ -1.6
CENPAP49450 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.07□□□□□ -1.6
CENPAP49450 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 AC027369.2-201ENST00000528030 440 ntBASIC5.07□□□□□ -1.6
CENPAP49450 OR8A2P-201ENST00000528631 952 ntBASIC5.07□□□□□ -1.6
CENPAP49450 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 AC024940.3-201ENST00000538551 316 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.07□□□□□ -1.6
CENPAP49450 AC122688.1-201ENST00000541494 223 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 AL356801.1-201ENST00000559320 294 ntBASIC5.07□□□□□ -1.6
CENPAP49450 CYCSP38-201ENST00000559840 322 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.07□□□□□ -1.6
CENPAP49450 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.07□□□□□ -1.6
CENPAP49450 AC090312.1-201ENST00000580637 348 ntBASIC5.07□□□□□ -1.6
CENPAP49450 MIR4472-2-201ENST00000582069 67 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 AC079610.2-201ENST00000604818 690 ntBASIC5.07□□□□□ -1.6
CENPAP49450 MIR6133-201ENST00000617057 108 ntBASIC5.07□□□□□ -1.6
CENPAP49450 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 BMS1P21-201ENST00000634565 365 ntBASIC5.07□□□□□ -1.6
CENPAP49450 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.07□□□□□ -1.6
CENPAP49450 AC119674.1-212ENST00000641155 993 ntBASIC5.07□□□□□ -1.6
CENPAP49450 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 AC068870.1-201ENST00000563737 2455 ntBASIC5.07□□□□□ -1.6
CENPAP49450 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CENPAP49450 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 MT-RNR2-201ENST00000387347 1559 ntBASIC5.07□□□□□ -1.6
CENPAP49450 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.07□□□□□ -1.6
CENPAP49450 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CENPAP49450 AL445437.1-201ENST00000623157 3087 ntBASIC5.07□□□□□ -1.6
CENPAP49450 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CENPAP49450 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CENPAP49450 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.06□□□□□ -1.6
CENPAP49450 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CENPAP49450 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CENPAP49450 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.06□□□□□ -1.6
CENPAP49450 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CENPAP49450 AC010329.2-201ENST00000595195 2737 ntBASIC5.06□□□□□ -1.6
CENPAP49450 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.06□□□□□ -1.6
CENPAP49450 AC007938.2-201ENST00000604666 2634 ntBASIC5.06□□□□□ -1.6
CENPAP49450 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CENPAP49450 OR52B1P-201ENST00000316506 909 ntBASIC5.06□□□□□ -1.6
CENPAP49450 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CENPAP49450 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CENPAP49450 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CENPAP49450 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.06□□□□□ -1.6
CENPAP49450 MTCO3P4-201ENST00000419236 787 ntBASIC5.06□□□□□ -1.6
CENPAP49450 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.06□□□□□ -1.6
CENPAP49450 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms