Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC026826.3-201ENST00000561747 158 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 OR1E3-201ENST00000575608 948 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 AC124916.2-201ENST00000604416 224 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AP001437.1-201ENST00000608783 456 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AC244107.2-201ENST00000611773 76 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 AL591926.1-201ENST00000620542 217 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 MIR6806-201ENST00000622141 64 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.43□□□□□ -1.7
NKX2-1P43699 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NKX2-1P43699 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.43□□□□□ -1.7
NKX2-1P43699 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NKX2-1P43699 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.43□□□□□ -1.7
NKX2-1P43699 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.43□□□□□ -1.7
NKX2-1P43699 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NKX2-1P43699 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AL731532.2-201ENST00000623542 1953 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-1P43699 RNU6-468P-201ENST00000384003 109 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 RNU1-74P-201ENST00000384108 171 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC007738.1-201ENST00000413892 348 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AK4P4-201ENST00000419465 646 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AKR1B10P1-201ENST00000425765 942 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-1P43699 PNKDP1-201ENST00000435914 430 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 MED6P1-201ENST00000439659 713 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL645931.1-201ENST00000439737 410 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC073909.1-201ENST00000447112 999 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 RPL23AP12-201ENST00000467573 473 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 RPL5P22-201ENST00000480199 884 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL117692.1-201ENST00000494283 713 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC010627.1-201ENST00000503819 1294 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC022360.1-201ENST00000521058 340 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AP006245.2-201ENST00000522004 300 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-1P43699 MED21-206ENST00000546323 575 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 YWHAZP1-201ENST00000556286 722 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL356801.1-201ENST00000559320 294 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC027104.1-201ENST00000563702 681 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-1P43699 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.42□□□□□ -1.7
NKX2-1P43699 VN1R84P-201ENST00000593697 235 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 TEX41-218ENST00000596540 882 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-1P43699 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC091057.3-201ENST00000602684 733 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 uc_338.9-201ENST00000617424 182 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL121890.2-201ENST00000617644 465 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC073342.3-201ENST00000624211 193 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.42□□□□□ -1.7
NKX2-1P43699 AC132825.7-201ENST00000638744 335 ntBASIC4.42□□□□□ -1.7
NKX2-1P43699 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
NKX2-1P43699 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NKX2-1P43699 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms