Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC124283.4-201ENST00000581815 456 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 PRPF19P1-201ENST00000584766 898 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 AC006272.2-201ENST00000594725 163 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTPN9P43378 AP003476.1-201ENST00000623984 516 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN9P43378 AL445984.1-201ENST00000637834 659 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.46□□□□□ -1.54
PTPN9P43378 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTPN9P43378 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PTPN9P43378 AL359715.4-201ENST00000606629 1436 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 AC107021.2-201ENST00000567714 2095 ntBASIC5.46□□□□□ -1.54
PTPN9P43378 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.46□□□□□ -1.54
PTPN9P43378 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PTPN9P43378 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PTPN9P43378 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AL024507.1-201ENST00000412741 274 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 RPL35AP24-201ENST00000413846 330 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 MTND4P11-201ENST00000417020 1058 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.45□□□□□ -1.54
PTPN9P43378 EI24P4-201ENST00000423683 1078 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 RPS4XP16-201ENST00000427198 791 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 HMGN2P27-201ENST00000427352 270 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 COPS8P2-201ENST00000473228 627 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 OR2AO1P-201ENST00000476497 403 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC112518.2-201ENST00000508565 425 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.45□□□□□ -1.54
PTPN9P43378 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.45□□□□□ -1.54
PTPN9P43378 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC127381.1-201ENST00000555979 939 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC007225.2-201ENST00000562529 256 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC022884.2-201ENST00000578535 580 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 SNORD39.2-201ENST00000579995 76 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 FAM106CP-201ENST00000582212 507 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 MIR4760-201ENST00000585040 80 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC068020.1-201ENST00000594215 661 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC068620.3-201ENST00000602749 560 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC130352.1-201ENST00000602979 661 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC005034.4-201ENST00000603612 899 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC019131.2-201ENST00000609071 870 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC022467.1-201ENST00000614738 749 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC091046.2-201ENST00000620775 665 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 AL355480.1-201ENST00000629041 99 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 AC135068.12-201ENST00000637370 931 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.45□□□□□ -1.54
PTPN9P43378 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.45□□□□□ -1.54
PTPN9P43378 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.45□□□□□ -1.54
PTPN9P43378 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 SMG1P7-201ENST00000565246 2704 ntBASIC5.45□□□□□ -1.54
PTPN9P43378 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PTPN9P43378 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN9P43378 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
PTPN9P43378 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PTPN9P43378 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PTPN9P43378 MIR16-2-201ENST00000362117 81 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 U3.7-201ENST00000363668 216 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 RNU6-1000P-201ENST00000391066 106 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 AL034403.1-201ENST00000399414 885 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 MIR1286-201ENST00000408112 78 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 MIR1182-201ENST00000408363 97 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC009238.2-201ENST00000431026 355 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 OR52B5P-201ENST00000435337 951 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms