Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC1A1P43005 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SLC1A1P43005 ARL4AP5-201ENST00000404372 599 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 AC079355.1-201ENST00000421770 223 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.03□□□□□ -1.6
SLC1A1P43005 TDGF1P1-201ENST00000445734 527 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.03□□□□□ -1.6
SLC1A1P43005 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC1A1P43005 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
SLC1A1P43005 BUD31P1-201ENST00000521828 359 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC1A1P43005 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC1A1P43005 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.03□□□□□ -1.6
SLC1A1P43005 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC1A1P43005 AC007497.1-201ENST00000610421 561 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.03□□□□□ -1.6
SLC1A1P43005 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SLC1A1P43005 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SLC1A1P43005 AL513548.1-201ENST00000562904 1724 ntBASIC5.03□□□□□ -1.6
SLC1A1P43005 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC139713.2-215ENST00000641428 5037 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SLC1A1P43005 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC1A1P43005 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SLC1A1P43005 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
SLC1A1P43005 RNU6-171P-201ENST00000384354 107 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AC007068.1-201ENST00000396690 844 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 HMGB3P7-201ENST00000400214 611 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AL080315.1-201ENST00000406055 466 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 RN7SKP273-201ENST00000411392 314 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AC114755.2-201ENST00000413520 361 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 SETP10-201ENST00000424368 814 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC093414.1-201ENST00000434712 514 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC1A1P43005 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 MYO5BP2-201ENST00000449815 1277 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.02□□□□□ -1.61
SLC1A1P43005 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.02□□□□□ -1.61
SLC1A1P43005 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC093249.4-201ENST00000564755 259 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.02□□□□□ -1.61
SLC1A1P43005 COX6CP4-201ENST00000605798 228 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 AL121612.2-201ENST00000612261 482 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 EIF3FP1-201ENST00000613970 806 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SLC1A1P43005 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
SLC1A1P43005 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
SLC1A1P43005 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 AC011503.2-201ENST00000594230 1500 ntBASIC5.02□□□□□ -1.61
SLC1A1P43005 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SLC1A1P43005 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 CR383656.5-201ENST00000547616 1340 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
SLC1A1P43005 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
SLC1A1P43005 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 U8.4-201ENST00000363626 134 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 RNU1-106P-201ENST00000384382 164 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 AL589994.1-201ENST00000404962 340 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 Z68694.1-201ENST00000413929 841 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC1A1P43005 RPL7P57-201ENST00000423238 740 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AL450263.2-201ENST00000439400 589 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.01□□□□□ -1.61
SLC1A1P43005 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 RN7SKP147-201ENST00000517154 244 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AC013701.1-201ENST00000522657 465 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC1A1P43005 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC1A1P43005 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.01□□□□□ -1.61
SLC1A1P43005 RN7SL802P-201ENST00000577858 299 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.01□□□□□ -1.61
SLC1A1P43005 AC020910.3-201ENST00000603701 874 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 AC234782.5-201ENST00000617723 324 ntBASIC5.01□□□□□ -1.61
SLC1A1P43005 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
SLC1A1P43005 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
SLC1A1P43005 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms