Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.01□□□□□ -1.61
HTTP42858 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.01□□□□□ -1.61
HTTP42858 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.01□□□□□ -1.61
HTTP42858 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.01□□□□□ -1.61
HTTP42858 BMPR1A-201ENST00000372037 11255 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
HTTP42858 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC5.01□□□□□ -1.61
HTTP42858 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HTTP42858 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 U8.11-201ENST00000384699 133 ntBASIC5□□□□□ -1.61
HTTP42858 U8.12-201ENST00000384701 133 ntBASIC5□□□□□ -1.61
HTTP42858 AL035079.1-201ENST00000405210 287 ntBASIC5□□□□□ -1.61
HTTP42858 NOTCH2P1-201ENST00000443481 624 ntBASIC5□□□□□ -1.61
HTTP42858 U8.18-201ENST00000459285 133 ntBASIC5□□□□□ -1.61
HTTP42858 RPL35P6-201ENST00000490024 372 ntBASIC5□□□□□ -1.61
HTTP42858 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
HTTP42858 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 AL031119.1-201ENST00000404707 1879 ntBASIC5□□□□□ -1.61
HTTP42858 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
HTTP42858 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5□□□□□ -1.61
HTTP42858 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5□□□□□ -1.61
HTTP42858 AL451139.1-201ENST00000434718 346 ntBASIC5□□□□□ -1.61
HTTP42858 AC004980.3-201ENST00000447046 365 ntBASIC5□□□□□ -1.61
HTTP42858 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5□□□□□ -1.61
HTTP42858 DUX4L52-201ENST00000549363 777 ntBASIC5□□□□□ -1.61
HTTP42858 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5□□□□□ -1.61
HTTP42858 MIR7853-201ENST00000584820 132 ntBASIC5□□□□□ -1.61
HTTP42858 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
HTTP42858 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
HTTP42858 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.99□□□□□ -1.61
HTTP42858 RNA5SP360-201ENST00000516555 118 ntBASIC4.99□□□□□ -1.61
HTTP42858 GTF2IP22-201ENST00000554443 182 ntBASIC4.99□□□□□ -1.61
HTTP42858 LINC00622-201ENST00000562811 1570 ntBASIC4.99□□□□□ -1.61
HTTP42858 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.99□□□□□ -1.61
HTTP42858 AL356121.2-201ENST00000624715 780 ntBASIC4.99□□□□□ -1.61
HTTP42858 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.99□□□□□ -1.61
HTTP42858 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.99□□□□□ -1.61
HTTP42858 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HTTP42858 ABCF2P2-201ENST00000450549 296 ntBASIC4.99□□□□□ -1.61
HTTP42858 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.99□□□□□ -1.61
HTTP42858 RN7SKP248-201ENST00000516278 305 ntBASIC4.99□□□□□ -1.61
HTTP42858 BPIFA4P-203ENST00000603168 689 ntBASIC4.99□□□□□ -1.61
HTTP42858 AC090912.3-201ENST00000609775 533 ntBASIC4.99□□□□□ -1.61
HTTP42858 AC007342.8-201ENST00000623278 678 ntBASIC4.99□□□□□ -1.61
HTTP42858 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 AL121950.1-201ENST00000624993 2077 ntBASIC4.99□□□□□ -1.61
HTTP42858 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 TRIM66-201ENST00000299550 9753 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 ZNF285B-201ENST00000561698 1767 ntBASIC4.99□□□□□ -1.61
HTTP42858 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HTTP42858 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HTTP42858 MIR7-3-201ENST00000384898 110 ntBASIC4.99□□□□□ -1.61
HTTP42858 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.99□□□□□ -1.61
HTTP42858 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.99□□□□□ -1.61
HTTP42858 AP000619.3-201ENST00000535634 1127 ntBASIC4.99□□□□□ -1.61
HTTP42858 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.99□□□□□ -1.61
HTTP42858 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.99□□□□□ -1.61
HTTP42858 AC019176.2-201ENST00000611579 315 ntBASIC4.99□□□□□ -1.61
HTTP42858 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
HTTP42858 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
HTTP42858 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
HTTP42858 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HTTP42858 TCEA1P4-201ENST00000415066 844 ntBASIC4.98□□□□□ -1.61
HTTP42858 NPM1P26-201ENST00000426339 738 ntBASIC4.98□□□□□ -1.61
HTTP42858 HMGN2P31-201ENST00000432430 273 ntBASIC4.98□□□□□ -1.61
HTTP42858 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.98□□□□□ -1.61
HTTP42858 NANOGP10-201ENST00000453325 895 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC008481.1-201ENST00000463278 396 ntBASIC4.98□□□□□ -1.61
HTTP42858 AL592156.1-201ENST00000508758 304 ntBASIC4.98□□□□□ -1.61
HTTP42858 AC021193.1-201ENST00000511607 420 ntBASIC4.98□□□□□ -1.61
HTTP42858 OR7A19P-201ENST00000608051 733 ntBASIC4.98□□□□□ -1.61
HTTP42858 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HTTP42858 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HTTP42858 AL590004.4-201ENST00000566733 7060 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms