Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC1P41238 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC1P41238 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.64
APOBEC1P41238 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
APOBEC1P41238 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC1P41238 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 RNU6-666P-201ENST00000363499 107 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 RN7SKP206-201ENST00000410823 293 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AL390774.1-201ENST00000411924 246 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC010385.1-201ENST00000412374 256 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC079809.1-201ENST00000415468 276 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 EIF4A1P1-201ENST00000420241 934 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 PTP4A1P7-201ENST00000423476 514 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 CHEK2P5-201ENST00000423877 246 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC115285.1-201ENST00000424879 736 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 DEFB130D-201ENST00000426866 237 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 FO393419.3-201ENST00000428741 282 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AL136231.1-201ENST00000429407 730 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 FAM96AP1-201ENST00000430879 482 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 CYCSP6-201ENST00000434498 302 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 YWHAZP2-201ENST00000440317 728 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC092685.1-201ENST00000447960 1243 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC016724.1-201ENST00000453215 421 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC058823.1-201ENST00000485315 474 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 RN7SL101P-201ENST00000496350 279 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC098976.1-201ENST00000513014 541 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.83□□□□□ -1.64
APOBEC1P41238 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC084759.1-201ENST00000561168 290 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC1P41238 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC1P41238 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC112503.1-201ENST00000608436 391 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC024023.1-201ENST00000624530 922 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AC006927.2-201ENST00000639256 389 ntBASIC4.83□□□□□ -1.64
APOBEC1P41238 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
APOBEC1P41238 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.83□□□□□ -1.64
APOBEC1P41238 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
APOBEC1P41238 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.82□□□□□ -1.64
APOBEC1P41238 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.82□□□□□ -1.64
APOBEC1P41238 AL353796.1-201ENST00000561542 3241 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.82□□□□□ -1.64
APOBEC1P41238 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
APOBEC1P41238 OR9G4-201ENST00000302957 984 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
APOBEC1P41238 RN7SKP160-201ENST00000363804 340 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.82□□□□□ -1.64
APOBEC1P41238 OR1L6-202ENST00000373684 1044 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RNU6-532P-201ENST00000384318 107 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 MIR142-201ENST00000384835 87 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RNU1-77P-201ENST00000390868 162 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RNA5SP339-201ENST00000390987 122 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RNU6-244P-201ENST00000391028 104 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 HMGB3P7-201ENST00000400214 611 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RPL5P19-201ENST00000404228 893 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 RNA5SP498-201ENST00000411342 120 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 VN1R51P-201ENST00000411675 945 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 DPPA2P2-201ENST00000418220 897 ntBASIC4.82□□□□□ -1.64
APOBEC1P41238 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms