Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR6862-1-201ENST00000613016 70 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 MIR6862-2-201ENST00000614755 70 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 AC016957.2-201ENST00000616998 848 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 AC139769.3-201ENST00000618383 175 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.13□□□□□ -1.59
HNF4AP41235 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.13□□□□□ -1.59
HNF4AP41235 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.13□□□□□ -1.59
HNF4AP41235 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.13□□□□□ -1.59
HNF4AP41235 AC136428.4-201ENST00000634254 1155 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 AL139254.3-201ENST00000641097 674 ntBASIC5.13□□□□□ -1.59
HNF4AP41235 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HNF4AP41235 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
HNF4AP41235 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HNF4AP41235 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
HNF4AP41235 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HNF4AP41235 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 MAPK10-304ENST00000641341 3984 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 THAP12P5-201ENST00000405864 2275 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.12□□□□□ -1.59
HNF4AP41235 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 AC023421.1-201ENST00000590535 1785 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.12□□□□□ -1.59
HNF4AP41235 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.12□□□□□ -1.59
HNF4AP41235 RN7SKP160-201ENST00000363804 340 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 MIR105-1-201ENST00000385222 81 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AL390774.1-201ENST00000411924 246 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 PCNPP4-201ENST00000414817 517 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC092570.3-201ENST00000420113 693 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 RPL12P34-201ENST00000424532 479 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.12□□□□□ -1.59
HNF4AP41235 RPL7L1P9-201ENST00000431298 745 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 CFL1P1-202ENST00000432948 411 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AL161722.2-201ENST00000434731 981 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC114878.1-201ENST00000441166 358 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.12□□□□□ -1.59
HNF4AP41235 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.12□□□□□ -1.59
HNF4AP41235 HMGB1P26-201ENST00000452520 628 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 RPS4XP1-201ENST00000482189 787 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 RPL7P41-201ENST00000485823 957 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 RNU6-1004P-201ENST00000516584 111 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HNF4AP41235 AC027369.5-201ENST00000533838 755 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 AL049870.4-201ENST00000555741 486 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 AC012557.1-201ENST00000607115 611 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC007342.8-201ENST00000623278 678 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HNF4AP41235 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HNF4AP41235 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HNF4AP41235 SAMMSON-227ENST00000642114 1199 ntBASIC5.12□□□□□ -1.59
HNF4AP41235 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.12□□□□□ -1.59
HNF4AP41235 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.12□□□□□ -1.59
HNF4AP41235 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HNF4AP41235 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HNF4AP41235 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 AC114546.3-201ENST00000623582 1734 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
HNF4AP41235 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC104623.2-202ENST00000623477 4002 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 OR9K1P-201ENST00000326513 941 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL589826.1-201ENST00000340697 249 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 RN7SKP74-201ENST00000362849 309 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 ATP5HP3-201ENST00000396994 486 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HNF4AP41235 RPS27AP11-201ENST00000402798 447 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HNF4AP41235 USP9YP19-201ENST00000412165 485 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 CTSL3P-202ENST00000412179 788 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 FAM96AP1-201ENST00000430879 482 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 RSL24D1P8-201ENST00000434442 492 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 GAPDHP58-201ENST00000438477 1006 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.11□□□□□ -1.59
HNF4AP41235 AC012512.1-201ENST00000446594 718 ntBASIC5.11□□□□□ -1.59
HNF4AP41235 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms