Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 C4BPAP1-201ENST00000415474 1893 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HOXD13P35453 RNU6-532P-201ENST00000384318 107 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 RNU6-225P-201ENST00000384613 103 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 ATP5HP3-201ENST00000396994 486 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AP000936.3-201ENST00000438127 255 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 IGHV5-78-201ENST00000450948 295 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 HMGB1P4-201ENST00000455362 567 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD13P35453 RPS18P6-201ENST00000476880 458 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC103833.1-201ENST00000517442 172 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD13P35453 HIGD1AP18-201ENST00000520730 278 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 MTND2P7-201ENST00000521337 640 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD13P35453 AC012339.2-201ENST00000523996 453 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HOXD13P35453 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 AC004825.1-201ENST00000555068 586 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.56□□□□□ -1.52
HOXD13P35453 MIR3691-201ENST00000578066 90 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 TAS2R6P-201ENST00000605022 826 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AC023813.4-201ENST00000607580 580 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 AL139407.1-201ENST00000613826 1175 ntBASIC5.56□□□□□ -1.52
HOXD13P35453 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD13P35453 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.56□□□□□ -1.52
HOXD13P35453 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HOXD13P35453 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD13P35453 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HOXD13P35453 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.56□□□□□ -1.52
HOXD13P35453 CR788268.1-201ENST00000603931 1809 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HOXD13P35453 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 OR5M12P-201ENST00000423388 929 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 RPS29P9-201ENST00000440360 171 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 TXNP5-201ENST00000441043 315 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 MTND2P30-201ENST00000456663 382 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 RN7SL177P-201ENST00000476596 299 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 RPL7AP10-201ENST00000481016 791 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 HMGN2P25-201ENST00000486956 268 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 RN7SL629P-201ENST00000489622 285 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AC010350.1-201ENST00000504908 231 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 ENPP7P11-201ENST00000505915 627 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 MTND3P24-201ENST00000506306 329 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 MIR4691-201ENST00000583764 85 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 SS18L2P2-201ENST00000583960 235 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AC006116.3-201ENST00000592968 361 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 AL671309.1-201ENST00000603750 544 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 SUMO2P14-201ENST00000604488 293 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 AC135178.6-201ENST00000605314 398 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 AL023583.1-201ENST00000607518 1143 ntBASIC5.55□□□□□ -1.52
HOXD13P35453 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
HOXD13P35453 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.55□□□□□ -1.52
HOXD13P35453 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.55□□□□□ -1.52
HOXD13P35453 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HOXD13P35453 AC068446.1-201ENST00000556425 1549 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AC109780.1-201ENST00000451768 1344 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.54□□□□□ -1.52
HOXD13P35453 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
HOXD13P35453 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD13P35453 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
HOXD13P35453 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
HOXD13P35453 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.54□□□□□ -1.52
HOXD13P35453 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms