Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 RNU6-1251P-201ENST00000364502 107 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 RNA5SP87-201ENST00000384155 118 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 SNORD65-201ENST00000391079 73 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXA13P31271 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
HOXA13P31271 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 MTND2P25-201ENST00000449028 610 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AC010733.1-201ENST00000451515 401 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXA13P31271 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXA13P31271 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.65□□□□□ -1.5
HOXA13P31271 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXA13P31271 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.65□□□□□ -1.5
HOXA13P31271 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXA13P31271 AC008126.1-201ENST00000549019 480 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.65□□□□□ -1.5
HOXA13P31271 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 MIMT1-201ENST00000597105 1050 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AL133247.2-201ENST00000603236 482 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AL136295.6-201ENST00000610486 658 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 RNA5SP439-201ENST00000617595 124 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AC073342.3-201ENST00000624211 193 ntBASIC5.65□□□□□ -1.5
HOXA13P31271 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.65□□□□□ -1.5
HOXA13P31271 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA13P31271 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
HOXA13P31271 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HOXA13P31271 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA13P31271 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HOXA13P31271 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA13P31271 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
HOXA13P31271 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.65□□□□□ -1.51
HOXA13P31271 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HOXA13P31271 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA13P31271 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
HOXA13P31271 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 PROS2P-201ENST00000474651 1951 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA13P31271 CYB5AP4-201ENST00000396692 399 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 AL357515.1-201ENST00000402967 542 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 TBCAP2-201ENST00000416175 326 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA13P31271 AL157884.3-201ENST00000448273 1184 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 CCRL1P1-201ENST00000449542 1053 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 RPS17P2-201ENST00000461663 408 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA13P31271 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.64□□□□□ -1.51
HOXA13P31271 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA13P31271 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 AC108157.1-201ENST00000510511 539 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 RNU6-889P-201ENST00000517189 103 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 CDH12P4-201ENST00000517835 295 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 CDH12P3-201ENST00000517935 295 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 CDH12P1-201ENST00000518435 295 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 OR10D4P-201ENST00000525892 951 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXA13P31271 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 TVP23CP2-201ENST00000571473 623 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 MIR4737-201ENST00000583979 81 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXA13P31271 AC019206.1-201ENST00000621938 425 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 AC103798.2-201ENST00000624292 632 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXA13P31271 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 ZNF652P1-201ENST00000442420 1309 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 HSPA8P14-201ENST00000552265 1805 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 MTND4P21-201ENST00000453886 1357 ntBASIC5.64□□□□□ -1.51
HOXA13P31271 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXA13P31271 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXA13P31271 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXA13P31271 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA13P31271 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXA13P31271 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms