Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SNORA16A-201ENST00000384342 137 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 RNA5SP105-201ENST00000391123 113 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 OR8V1P-201ENST00000395193 873 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 TNPO1P1-201ENST00000423641 1138 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 RPS20P1-201ENST00000434853 354 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD40LGP29965 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 VDAC2P4-201ENST00000452925 711 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 RPS26P28-201ENST00000470806 348 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 AC025445.1-201ENST00000502728 300 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 PSMA2P2-201ENST00000504319 686 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 HMGB1P44-201ENST00000508597 572 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CD40LGP29965 NDUFB4P12-201ENST00000513465 390 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 SCARNA16.4-201ENST00000516956 187 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 NRBF2P4-201ENST00000520874 850 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC069240.1-201ENST00000548774 375 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC068446.3-201ENST00000555285 382 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 AP005432.2-201ENST00000608162 586 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40LGP29965 AL669942.2-201ENST00000620352 697 ntBASIC4.42□□□□□ -1.7
CD40LGP29965 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
CD40LGP29965 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.42□□□□□ -1.7
CD40LGP29965 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CD40LGP29965 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.42□□□□□ -1.7
CD40LGP29965 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.42□□□□□ -1.7
CD40LGP29965 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40LGP29965 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40LGP29965 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CD40LGP29965 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40LGP29965 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CD40LGP29965 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC090017.1-201ENST00000548612 1779 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC4.41□□□□□ -1.7
CD40LGP29965 MIR365B-201ENST00000362317 111 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 RNA5SP394-201ENST00000364216 119 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 RNA5SP132-201ENST00000364725 118 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 RNA5SP131-201ENST00000365452 119 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40LGP29965 HSPA8P15-201ENST00000401676 786 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 U3.35-201ENST00000408405 208 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 RNU6-233P-201ENST00000410845 141 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 RAB9AP4-201ENST00000415230 609 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC096644.3-201ENST00000416788 338 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CD40LGP29965 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.41□□□□□ -1.7
CD40LGP29965 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CD40LGP29965 AC022022.1-201ENST00000430304 178 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.41□□□□□ -1.7
CD40LGP29965 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 RPS11P7-201ENST00000442125 465 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC011753.3-201ENST00000443436 406 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.41□□□□□ -1.7
CD40LGP29965 RPL36AP39-201ENST00000445859 318 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 GAPDHP25-201ENST00000447061 1001 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 RN7SL51P-201ENST00000468230 285 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.41□□□□□ -1.7
CD40LGP29965 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD40LGP29965 HMGB3P13-201ENST00000511263 607 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC022826.1-201ENST00000519383 805 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.41□□□□□ -1.7
CD40LGP29965 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.41□□□□□ -1.7
CD40LGP29965 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
CD40LGP29965 OR1F2P-201ENST00000570470 933 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC010547.6-201ENST00000571789 193 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 MIR4505-201ENST00000582238 73 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 MIR4310-201ENST00000582950 57 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 COX6CP4-201ENST00000605798 228 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CD40LGP29965 AC092079.1-201ENST00000558620 1985 ntBASIC4.41□□□□□ -1.7
CD40LGP29965 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.41□□□□□ -1.7
CD40LGP29965 AP000756.2-201ENST00000624168 2567 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms