Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC093535.2-201ENST00000624769 2326 ntBASIC5.11□□□□□ -1.59
CDH3P22223 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
CDH3P22223 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH3P22223 RNA5SP507-201ENST00000363603 121 ntBASIC5.11□□□□□ -1.59
CDH3P22223 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH3P22223 SNORA70-201ENST00000384436 135 ntBASIC5.11□□□□□ -1.59
CDH3P22223 RNU6-178P-201ENST00000384631 104 ntBASIC5.11□□□□□ -1.59
CDH3P22223 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH3P22223 RNA5SP241-201ENST00000391326 114 ntBASIC5.11□□□□□ -1.59
CDH3P22223 RN7SKP273-201ENST00000411392 314 ntBASIC5.11□□□□□ -1.59
CDH3P22223 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
CDH3P22223 AC009302.1-201ENST00000417147 390 ntBASIC5.11□□□□□ -1.59
CDH3P22223 FAR1P1-201ENST00000427163 934 ntBASIC5.11□□□□□ -1.59
CDH3P22223 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC012497.1-201ENST00000429392 575 ntBASIC5.11□□□□□ -1.59
CDH3P22223 MTCO1P45-201ENST00000431457 267 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AP000936.3-201ENST00000438127 255 ntBASIC5.11□□□□□ -1.59
CDH3P22223 GTF3AP5-201ENST00000442645 697 ntBASIC5.11□□□□□ -1.59
CDH3P22223 RPL31P20-201ENST00000449593 360 ntBASIC5.11□□□□□ -1.59
CDH3P22223 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AC058823.1-201ENST00000485315 474 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC093763.2-201ENST00000505334 1223 ntBASIC5.11□□□□□ -1.59
CDH3P22223 RNA5SP228-201ENST00000516232 133 ntBASIC5.11□□□□□ -1.59
CDH3P22223 SCARNA20.4-201ENST00000516969 131 ntBASIC5.11□□□□□ -1.59
CDH3P22223 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AC079064.1-201ENST00000528365 362 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH3P22223 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.11□□□□□ -1.59
CDH3P22223 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 MTND2P13-201ENST00000577438 1039 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 AL021707.7-201ENST00000607991 416 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC103798.2-201ENST00000624292 632 ntBASIC5.11□□□□□ -1.59
CDH3P22223 AC106730.3-201ENST00000624568 641 ntBASIC5.11□□□□□ -1.59
CDH3P22223 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.11□□□□□ -1.59
CDH3P22223 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH3P22223 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH3P22223 CASC19-221ENST00000641309 1382 ntBASIC5.11□□□□□ -1.59
CDH3P22223 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH3P22223 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDH3P22223 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDH3P22223 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDH3P22223 AL022393.1-201ENST00000625142 1677 ntBASIC5.11□□□□□ -1.59
CDH3P22223 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDH3P22223 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.11□□□□□ -1.59
CDH3P22223 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 AC007618.1-201ENST00000366455 732 ntBASIC5.1□□□□□ -1.59
CDH3P22223 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 SNORA40.4-201ENST00000390971 128 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AL078599.1-201ENST00000402075 293 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
CDH3P22223 RPL21P67-201ENST00000402896 478 ntBASIC5.1□□□□□ -1.59
CDH3P22223 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 RN7SKP126-201ENST00000411143 300 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH3P22223 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 AL390879.2-203ENST00000426943 1121 ntBASIC5.1□□□□□ -1.59
CDH3P22223 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH3P22223 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH3P22223 NDUFB4P8-201ENST00000435351 367 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC092447.2-201ENST00000435487 669 ntBASIC5.1□□□□□ -1.59
CDH3P22223 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH3P22223 AL691517.1-201ENST00000440833 1235 ntBASIC5.1□□□□□ -1.59
CDH3P22223 RAB28P3-201ENST00000448325 597 ntBASIC5.1□□□□□ -1.59
CDH3P22223 MTND5P8-201ENST00000449817 1083 ntBASIC5.1□□□□□ -1.59
CDH3P22223 RPL10P17-201ENST00000453852 316 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AL389915.2-201ENST00000454576 441 ntBASIC5.1□□□□□ -1.59
CDH3P22223 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CDH3P22223 Z92846.1-201ENST00000456203 268 ntBASIC5.1□□□□□ -1.59
CDH3P22223 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
CDH3P22223 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH3P22223 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 GTF2F2P1-201ENST00000511083 675 ntBASIC5.1□□□□□ -1.59
CDH3P22223 RNU6-491P-201ENST00000516099 110 ntBASIC5.1□□□□□ -1.59
CDH3P22223 RNU6-467P-201ENST00000517027 110 ntBASIC5.1□□□□□ -1.59
CDH3P22223 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.1□□□□□ -1.59
CDH3P22223 SMG1P6-201ENST00000532337 2930 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC008147.3-201ENST00000548666 354 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 AC040958.1-201ENST00000561102 201 ntBASIC5.1□□□□□ -1.59
CDH3P22223 MIR3691-201ENST00000578066 90 ntBASIC5.1□□□□□ -1.59
CDH3P22223 RN7SL435P-201ENST00000584418 282 ntBASIC5.1□□□□□ -1.59
CDH3P22223 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 AC009237.13-201ENST00000603193 276 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC100757.1-201ENST00000616872 1835 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC090527.3-201ENST00000619041 548 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AC074276.2-201ENST00000619891 348 ntBASIC5.1□□□□□ -1.59
CDH3P22223 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms