Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC116533.1-201ENST00000459748 321 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 RN7SL691P-201ENST00000494487 301 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AK4P6-201ENST00000505168 528 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC8.08□□□□□ -1.12
TOP2AP11388 IGKV3OR22-2-201ENST00000517943 313 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AC105031.1-201ENST00000518550 476 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AC025884.1-201ENST00000556034 378 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 IGKV2OR2-2-201ENST00000605025 300 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 ARF4P1-201ENST00000605447 541 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC8.08□□□□□ -1.12
TOP2AP11388 ARHGAP42P3-201ENST00000443989 2508 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 AC025031.4-201ENST00000621248 3271 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TOP2AP11388 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC8.08□□□□□ -1.12
TOP2AP11388 AC007738.1-201ENST00000413892 348 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AL358176.3-201ENST00000420757 454 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC8.08□□□□□ -1.12
TOP2AP11388 AC053481.1-201ENST00000467217 306 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC8.08□□□□□ -1.12
TOP2AP11388 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.08□□□□□ -1.12
TOP2AP11388 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC8.08□□□□□ -1.12
TOP2AP11388 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC8.08□□□□□ -1.12
TOP2AP11388 LINC00622-201ENST00000562811 1570 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 AC239868.2-201ENST00000564237 4527 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.07□□□□□ -1.12
TOP2AP11388 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOP2AP11388 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TOP2AP11388 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
TOP2AP11388 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC8.07□□□□□ -1.12
TOP2AP11388 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOP2AP11388 RPL32P23-201ENST00000397237 405 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 TMBIM7P-201ENST00000418074 855 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC8.07□□□□□ -1.12
TOP2AP11388 CYCSP24-201ENST00000445119 316 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 AL935212.3-201ENST00000450729 284 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 MYL12BP2-201ENST00000503948 512 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC8.07□□□□□ -1.12
TOP2AP11388 AP003730.1-201ENST00000524605 285 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC8.07□□□□□ -1.12
TOP2AP11388 AL161637.1-201ENST00000622380 412 ntBASIC8.07□□□□□ -1.12
TOP2AP11388 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
TOP2AP11388 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC8.07□□□□□ -1.12
TOP2AP11388 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TOP2AP11388 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOP2AP11388 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TOP2AP11388 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TOP2AP11388 AL121657.1-201ENST00000327215 531 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC008549.2-201ENST00000333482 706 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 MIR383-201ENST00000362257 73 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
TOP2AP11388 PPIAP31-201ENST00000405422 495 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 E2F6P2-201ENST00000420708 748 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TOP2AP11388 CKS1BP6-201ENST00000424932 240 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AL136231.1-201ENST00000429407 730 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 RPL35AP21-201ENST00000437667 333 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TOP2AP11388 AC023424.1-201ENST00000496058 459 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.06□□□□□ -1.12
TOP2AP11388 AC015912.2-201ENST00000571053 181 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC090181.2-201ENST00000602975 672 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC090948.2-201ENST00000607363 564 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 AC140479.6-201ENST00000633535 357 ntBASIC8.06□□□□□ -1.12
TOP2AP11388 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TOP2AP11388 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
TOP2AP11388 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC8.05□□□□□ -1.12
TOP2AP11388 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC8.05□□□□□ -1.12
TOP2AP11388 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 OR5P1P-201ENST00000299512 925 ntBASIC8.05□□□□□ -1.12
TOP2AP11388 Z98745.1-201ENST00000402553 494 ntBASIC8.05□□□□□ -1.12
TOP2AP11388 AC079809.1-201ENST00000415468 276 ntBASIC8.05□□□□□ -1.12
TOP2AP11388 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC8.05□□□□□ -1.12
TOP2AP11388 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC8.05□□□□□ -1.12
TOP2AP11388 CDC27P1-201ENST00000445384 715 ntBASIC8.05□□□□□ -1.12
TOP2AP11388 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.05□□□□□ -1.12
TOP2AP11388 AC093166.2-201ENST00000455969 1017 ntBASIC8.05□□□□□ -1.12
TOP2AP11388 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC8.05□□□□□ -1.12
TOP2AP11388 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC8.05□□□□□ -1.12
TOP2AP11388 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TOP2AP11388 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
TOP2AP11388 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC8.05□□□□□ -1.12
TOP2AP11388 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 AC100871.1-201ENST00000507871 1456 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 SLC4A1APP1-201ENST00000419995 602 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 RPL34P6-201ENST00000432390 345 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 RHEBP2-201ENST00000450289 600 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.04□□□□□ -1.12
TOP2AP11388 AC098799.3-201ENST00000506095 438 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC8.04□□□□□ -1.12
TOP2AP11388 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms