Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.19□□□□□ -1.42
COL5A2P05997 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
COL5A2P05997 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL5A2P05997 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL5A2P05997 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A2P05997 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 PHBP16-201ENST00000446318 950 ntBASIC6.18□□□□□ -1.42
COL5A2P05997 SCARNA10-201ENST00000459255 330 ntBASIC6.18□□□□□ -1.42
COL5A2P05997 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.18□□□□□ -1.42
COL5A2P05997 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A2P05997 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.18□□□□□ -1.42
COL5A2P05997 AC023043.4-201ENST00000612081 449 ntBASIC6.18□□□□□ -1.42
COL5A2P05997 MIR492-201ENST00000638676 116 ntBASIC6.18□□□□□ -1.42
COL5A2P05997 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL5A2P05997 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
COL5A2P05997 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A2P05997 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A2P05997 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL5A2P05997 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.18□□□□□ -1.42
COL5A2P05997 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL5A2P05997 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 AC011933.1-201ENST00000413334 321 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 AL451139.1-201ENST00000434718 346 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 MRPL35P2-201ENST00000448009 511 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.17□□□□□ -1.42
COL5A2P05997 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 AC116533.1-201ENST00000459748 321 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.17□□□□□ -1.42
COL5A2P05997 AC041039.1-201ENST00000485656 536 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC6.17□□□□□ -1.42
COL5A2P05997 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 TRAV8-5-201ENST00000537369 341 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC6.17□□□□□ -1.42
COL5A2P05997 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.17□□□□□ -1.42
COL5A2P05997 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.17□□□□□ -1.42
COL5A2P05997 AL669831.5-218ENST00000591702 1873 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL5A2P05997 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 AC034229.2-201ENST00000566945 2508 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
COL5A2P05997 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
COL5A2P05997 AC073365.1-203ENST00000641055 1992 ntBASIC6.17□□□□□ -1.42
COL5A2P05997 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL5A2P05997 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.16□□□□□ -1.42
COL5A2P05997 VN2R3P-201ENST00000422626 1412 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC135352.1-201ENST00000506173 1418 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 RPS26P8-201ENST00000393490 348 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AL022722.2-201ENST00000402519 180 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 RPL23AP26-201ENST00000412728 464 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC092162.1-201ENST00000432828 434 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC6.16□□□□□ -1.42
COL5A2P05997 RPL23AP93-201ENST00000440847 484 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 UQCRHP4-201ENST00000471686 272 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 RPS27AP16-201ENST00000492222 470 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC023424.1-201ENST00000496058 459 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.16□□□□□ -1.42
COL5A2P05997 MIR2116-201ENST00000517221 80 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AP000827.1-201ENST00000527814 258 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.16□□□□□ -1.42
COL5A2P05997 AP001160.4-201ENST00000596971 382 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC026367.3-201ENST00000619032 590 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC034229.5-201ENST00000624258 185 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 AC006453.5-201ENST00000636451 619 ntBASIC6.16□□□□□ -1.42
COL5A2P05997 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC6.16□□□□□ -1.42
COL5A2P05997 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.16□□□□□ -1.42
COL5A2P05997 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL5A2P05997 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
COL5A2P05997 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL5A2P05997 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
COL5A2P05997 RNU1-130P-201ENST00000363930 160 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 RNA5SP366-201ENST00000365454 123 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 TMBIM7P-201ENST00000418074 855 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 TRGV7-201ENST00000427089 353 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
COL5A2P05997 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.15□□□□□ -1.42
COL5A2P05997 NPM1P18-201ENST00000434232 732 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.15□□□□□ -1.42
COL5A2P05997 AC022034.3-201ENST00000471393 478 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 AP003730.1-201ENST00000524605 285 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 AGGF1P9-201ENST00000561884 913 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 AC006130.2-201ENST00000586202 326 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 AC004817.4-201ENST00000602396 3625 ntBASIC6.15□□□□□ -1.42
COL5A2P05997 AC090017.1-201ENST00000548612 1779 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms