Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNU6-40P-201ENST00000384254 107 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 OR2AT2P-201ENST00000413438 905 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC073464.3-201ENST00000422564 712 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 NAP1L4P2-201ENST00000425958 899 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 RNF19BPX-201ENST00000426224 625 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC002504.1-201ENST00000438281 691 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 GAPDHP58-201ENST00000438477 1006 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AL391987.1-201ENST00000441025 200 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AL158053.1-201ENST00000441503 453 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AP000281.1-201ENST00000444036 316 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLPTM1O96005 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC108751.2-201ENST00000469993 231 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 RPL7P41-201ENST00000485823 957 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AC090543.1-201ENST00000492168 485 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AC073073.1-201ENST00000493920 463 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 PCNAP1-201ENST00000505363 709 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.88□□□□□ -1.63
CLPTM1O96005 HMGN1P15-201ENST00000513870 295 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 HSPE1P2-201ENST00000554777 306 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC010547.6-201ENST00000571789 193 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AC011458.1-201ENST00000604034 617 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 PPATP2-201ENST00000605635 508 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.88□□□□□ -1.63
CLPTM1O96005 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLPTM1O96005 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.88□□□□□ -1.63
CLPTM1O96005 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CLPTM1O96005 AL672167.1-205ENST00000641112 3080 ntBASIC4.88□□□□□ -1.63
CLPTM1O96005 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
CLPTM1O96005 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC4.87□□□□□ -1.63
CLPTM1O96005 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC023421.1-201ENST00000590535 1785 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RNA5SP435-201ENST00000364044 108 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RNA5SP223-201ENST00000365174 120 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RN7SKP269-201ENST00000365545 319 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RNA5SP30-201ENST00000365552 115 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 RNU1-74P-201ENST00000384108 171 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AL356057.1-202ENST00000402263 756 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AL355143.1-201ENST00000407101 841 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RNA5SP178-201ENST00000410380 128 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 SDHDP6-201ENST00000414693 480 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 CYCSP10-201ENST00000417973 294 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.87□□□□□ -1.63
CLPTM1O96005 Z84478.1-201ENST00000438230 1219 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC005297.1-201ENST00000444765 862 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.87□□□□□ -1.63
CLPTM1O96005 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC087672.1-201ENST00000479876 766 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.87□□□□□ -1.63
CLPTM1O96005 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AF186190.1-201ENST00000517470 480 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC134698.5-201ENST00000519444 336 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.87□□□□□ -1.63
CLPTM1O96005 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLPTM1O96005 IGBP1P1-201ENST00000554337 1009 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AGGF1P9-201ENST00000561884 913 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.87□□□□□ -1.63
CLPTM1O96005 AC087283.1-201ENST00000604029 1074 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC009027.1-201ENST00000604510 479 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 AC067838.1-201ENST00000606064 577 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 RNA5SP440-201ENST00000612665 119 ntBASIC4.87□□□□□ -1.63
CLPTM1O96005 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms