Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 BX323845.1-201ENST00000432417 179 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC004938.1-201ENST00000438468 308 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 AC074367.1-201ENST00000438685 1125 ntBASIC4.88□□□□□ -1.63
SNX3O60493 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 AC007000.2-201ENST00000442564 487 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AP006222.1-205ENST00000450734 457 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC073476.1-201ENST00000452854 407 ntBASIC4.88□□□□□ -1.63
SNX3O60493 CALM1P2-201ENST00000452941 448 ntBASIC4.88□□□□□ -1.63
SNX3O60493 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 RN7SL568P-201ENST00000493069 298 ntBASIC4.88□□□□□ -1.63
SNX3O60493 RN7SL612P-201ENST00000497704 295 ntBASIC4.88□□□□□ -1.63
SNX3O60493 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 MTCYBP19-201ENST00000517463 1124 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 AC012339.2-201ENST00000523996 453 ntBASIC4.88□□□□□ -1.63
SNX3O60493 HMGB1P40-201ENST00000525121 540 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.88□□□□□ -1.63
SNX3O60493 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC4.88□□□□□ -1.63
SNX3O60493 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC4.88□□□□□ -1.63
SNX3O60493 BTG1P1-201ENST00000540396 508 ntBASIC4.88□□□□□ -1.63
SNX3O60493 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 AC121758.1-202ENST00000556917 658 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC027176.2-201ENST00000559166 746 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
SNX3O60493 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 AC068020.1-201ENST00000594215 661 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC011500.1-201ENST00000601963 469 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC130352.1-201ENST00000602979 661 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC007423.1-201ENST00000605009 627 ntBASIC4.88□□□□□ -1.63
SNX3O60493 COX6CP4-201ENST00000605798 228 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC092574.1-201ENST00000609771 420 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC008115.3-201ENST00000614874 549 ntBASIC4.88□□□□□ -1.63
SNX3O60493 RPL23AP61-201ENST00000623642 466 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC106730.3-201ENST00000624568 641 ntBASIC4.88□□□□□ -1.63
SNX3O60493 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.88□□□□□ -1.63
SNX3O60493 AC000123.3-201ENST00000624029 4975 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC007382.1-201ENST00000624376 2618 ntBASIC4.88□□□□□ -1.63
SNX3O60493 AC132825.1-201ENST00000463573 2247 ntBASIC4.88□□□□□ -1.63
SNX3O60493 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SNX3O60493 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 RNU6-31P-201ENST00000384388 108 ntBASIC4.87□□□□□ -1.63
SNX3O60493 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 ATP5HP3-201ENST00000396994 486 ntBASIC4.87□□□□□ -1.63
SNX3O60493 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 AL353692.2-201ENST00000407054 335 ntBASIC4.87□□□□□ -1.63
SNX3O60493 SNORA77-201ENST00000408716 125 ntBASIC4.87□□□□□ -1.63
SNX3O60493 RN7SKP240-201ENST00000410583 375 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AL596448.1-201ENST00000415024 392 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC073508.1-201ENST00000428866 656 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 ACA64.1-201ENST00000459171 127 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC108729.2-201ENST00000476543 840 ntBASIC4.87□□□□□ -1.63
SNX3O60493 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 AC098818.1-201ENST00000478593 252 ntBASIC4.87□□□□□ -1.63
SNX3O60493 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.87□□□□□ -1.63
SNX3O60493 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 AC027369.2-201ENST00000528030 440 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC027026.1-201ENST00000532323 742 ntBASIC4.87□□□□□ -1.63
SNX3O60493 CYCSP28-201ENST00000534284 321 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SNX3O60493 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SNX3O60493 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.87□□□□□ -1.63
SNX3O60493 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.87□□□□□ -1.63
SNX3O60493 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 RPL10P14-201ENST00000565265 298 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC4.87□□□□□ -1.63
SNX3O60493 ARGFXP2-201ENST00000579304 949 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC129778.1-202ENST00000623812 261 ntBASIC4.87□□□□□ -1.63
SNX3O60493 AC007683.2-201ENST00000624681 714 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 139.7 ms