Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 OR5H7P-201ENST00000514084 930 ntBASIC5.54□□□□□ -1.52
PROM1O43490 RNA5SP438-201ENST00000516561 112 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.54□□□□□ -1.52
PROM1O43490 AC104417.1-201ENST00000523974 751 ntBASIC5.54□□□□□ -1.52
PROM1O43490 EIF4A2P5-201ENST00000529914 499 ntBASIC5.54□□□□□ -1.52
PROM1O43490 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC006530.1-201ENST00000555980 571 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 AC015802.2-201ENST00000589690 189 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC119751.7-201ENST00000600494 245 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC124856.1-201ENST00000600819 896 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AC080013.3-201ENST00000606839 578 ntBASIC5.54□□□□□ -1.52
PROM1O43490 Z95327.3-201ENST00000610385 572 ntBASIC5.54□□□□□ -1.52
PROM1O43490 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC5.54□□□□□ -1.52
PROM1O43490 AP000676.3-201ENST00000623299 569 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 AC129778.1-202ENST00000623812 261 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 AL591379.1-207ENST00000635982 261 ntBASIC5.54□□□□□ -1.52
PROM1O43490 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.54□□□□□ -1.52
PROM1O43490 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PROM1O43490 OR11H2-202ENST00000641517 1085 ntBASIC5.54□□□□□ -1.52
PROM1O43490 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 AC104454.1-201ENST00000421341 1401 ntBASIC5.54□□□□□ -1.52
PROM1O43490 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PROM1O43490 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.54□□□□□ -1.52
PROM1O43490 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.54□□□□□ -1.52
PROM1O43490 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PROM1O43490 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC027228.2-201ENST00000567141 2154 ntBASIC5.53□□□□□ -1.52
PROM1O43490 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 AC109446.4-201ENST00000623235 2755 ntBASIC5.53□□□□□ -1.52
PROM1O43490 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PROM1O43490 MIR323A-201ENST00000362199 86 ntBASIC5.53□□□□□ -1.52
PROM1O43490 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 AC087752.1-201ENST00000391360 558 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AL136310.1-201ENST00000404926 654 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC092638.1-201ENST00000411966 1275 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 AC113412.1-201ENST00000425840 504 ntBASIC5.53□□□□□ -1.52
PROM1O43490 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 UBE2D3P1-201ENST00000436669 444 ntBASIC5.53□□□□□ -1.52
PROM1O43490 NDUFS5P5-201ENST00000437256 321 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AL359265.1-201ENST00000440296 795 ntBASIC5.53□□□□□ -1.52
PROM1O43490 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.53□□□□□ -1.52
PROM1O43490 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 RNU1-88P-201ENST00000459274 128 ntBASIC5.53□□□□□ -1.52
PROM1O43490 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 ST13P12-201ENST00000508958 1094 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC008837.1-201ENST00000511513 412 ntBASIC5.53□□□□□ -1.52
PROM1O43490 SNORA70.11-201ENST00000515987 138 ntBASIC5.53□□□□□ -1.52
PROM1O43490 SNORA70.13-201ENST00000516116 138 ntBASIC5.53□□□□□ -1.52
PROM1O43490 Y_RNA.667-201ENST00000516212 107 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC060775.1-201ENST00000518241 520 ntBASIC5.53□□□□□ -1.52
PROM1O43490 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.53□□□□□ -1.52
PROM1O43490 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PROM1O43490 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PROM1O43490 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 AC051619.2-201ENST00000559063 397 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC023813.2-201ENST00000564321 469 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.53□□□□□ -1.52
PROM1O43490 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.53□□□□□ -1.52
PROM1O43490 HIRAP1-201ENST00000605318 787 ntBASIC5.53□□□□□ -1.52
PROM1O43490 AL022394.1-201ENST00000606979 292 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 150.6 ms