Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CHD2O14647 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHD2O14647 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CHD2O14647 MIR133A2-201ENST00000347538 102 ntBASIC6.57□□□□□ -1.36
CHD2O14647 RNU1-94P-201ENST00000362627 173 ntBASIC6.57□□□□□ -1.36
CHD2O14647 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC6.57□□□□□ -1.36
CHD2O14647 RRM2P4-201ENST00000441721 562 ntBASIC6.57□□□□□ -1.36
CHD2O14647 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.57□□□□□ -1.36
CHD2O14647 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CHD2O14647 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC6.57□□□□□ -1.36
CHD2O14647 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC6.57□□□□□ -1.36
CHD2O14647 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD2O14647 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
CHD2O14647 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 CYCSP19-201ENST00000411715 316 ntBASIC6.56□□□□□ -1.36
CHD2O14647 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD2O14647 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD2O14647 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD2O14647 RN7SL558P-201ENST00000497468 299 ntBASIC6.56□□□□□ -1.36
CHD2O14647 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC6.56□□□□□ -1.36
CHD2O14647 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD2O14647 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.56□□□□□ -1.36
CHD2O14647 AC025884.1-201ENST00000556034 378 ntBASIC6.56□□□□□ -1.36
CHD2O14647 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC6.56□□□□□ -1.36
CHD2O14647 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CHD2O14647 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CHD2O14647 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CHD2O14647 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD2O14647 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 NDUFA5P1-201ENST00000433858 341 ntBASIC6.55□□□□□ -1.36
CHD2O14647 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD2O14647 SCARNA10-201ENST00000459255 330 ntBASIC6.55□□□□□ -1.36
CHD2O14647 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD2O14647 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD2O14647 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD2O14647 AC027216.1-201ENST00000577726 685 ntBASIC6.55□□□□□ -1.36
CHD2O14647 AC053481.3-201ENST00000577881 843 ntBASIC6.55□□□□□ -1.36
CHD2O14647 RN7SL703P-201ENST00000578485 302 ntBASIC6.55□□□□□ -1.36
CHD2O14647 SNORA74C-1-201ENST00000580726 201 ntBASIC6.55□□□□□ -1.36
CHD2O14647 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD2O14647 AP001160.4-201ENST00000596971 382 ntBASIC6.55□□□□□ -1.36
CHD2O14647 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD2O14647 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD2O14647 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC6.55□□□□□ -1.36
CHD2O14647 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
CHD2O14647 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CHD2O14647 AC021146.4-201ENST00000309229 279 ntBASIC6.55□□□□□ -1.36
CHD2O14647 RPL23AP26-201ENST00000412728 464 ntBASIC6.55□□□□□ -1.36
CHD2O14647 CEACAMP8-201ENST00000413902 580 ntBASIC6.55□□□□□ -1.36
CHD2O14647 RN7SL303P-201ENST00000469773 251 ntBASIC6.55□□□□□ -1.36
CHD2O14647 RN7SL810P-201ENST00000493031 276 ntBASIC6.55□□□□□ -1.36
CHD2O14647 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.55□□□□□ -1.36
CHD2O14647 RNU1-45P-201ENST00000517191 141 ntBASIC6.55□□□□□ -1.36
CHD2O14647 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.55□□□□□ -1.36
CHD2O14647 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 AL161912.2-201ENST00000565707 3007 ntBASIC6.54□□□□□ -1.36
CHD2O14647 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 AC008033.1-201ENST00000216407 1162 ntBASIC6.54□□□□□ -1.36
CHD2O14647 RNA5SP241-201ENST00000391326 114 ntBASIC6.54□□□□□ -1.36
CHD2O14647 AC079809.1-201ENST00000415468 276 ntBASIC6.54□□□□□ -1.36
CHD2O14647 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD2O14647 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.54□□□□□ -1.36
CHD2O14647 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.54□□□□□ -1.36
CHD2O14647 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC6.54□□□□□ -1.36
CHD2O14647 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.54□□□□□ -1.36
CHD2O14647 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
CHD2O14647 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD2O14647 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 VN2R3P-201ENST00000422626 1412 ntBASIC6.54□□□□□ -1.36
CHD2O14647 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 AC017104.4-201ENST00000636283 1592 ntBASIC6.54□□□□□ -1.36
CHD2O14647 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC6.54□□□□□ -1.36
CHD2O14647 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CHD2O14647 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD2O14647 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
CHD2O14647 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD2O14647 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CHD2O14647 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CHD2O14647 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms