Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 AP001642.1-201ENST00000624727 2117 ntBASIC4.85□□□□□ -1.63
SLC28A1O00337 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC28A1O00337 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC28A1O00337 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.85□□□□□ -1.63
SLC28A1O00337 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AC011493.1-201ENST00000596753 1632 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 PANDAR-201ENST00000629595 1506 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC28A1O00337 SNORA73.1-201ENST00000363107 205 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC28A1O00337 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 RN7SKP114-201ENST00000410327 279 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 RPL26P37-201ENST00000411983 438 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 QRSL1P2-201ENST00000418582 964 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 RPS26P13-201ENST00000419030 330 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AL353898.1-201ENST00000444055 238 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AL035551.1-201ENST00000446931 348 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 HMGB1P4-201ENST00000455362 567 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AC009127.1-201ENST00000467090 155 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 RPL7AP10-201ENST00000481016 791 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AL136038.1-201ENST00000497246 351 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ENPP7P9-201ENST00000514456 627 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.84□□□□□ -1.63
SLC28A1O00337 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AL049830.4-201ENST00000555149 351 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
SLC28A1O00337 AC233702.9-201ENST00000581528 203 ntBASIC4.84□□□□□ -1.63
SLC28A1O00337 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.84□□□□□ -1.63
SLC28A1O00337 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SLC28A1O00337 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SLC28A1O00337 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.84□□□□□ -1.64
SLC28A1O00337 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.84□□□□□ -1.64
SLC28A1O00337 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.64
SLC28A1O00337 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
SLC28A1O00337 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC28A1O00337 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SLC28A1O00337 SNORA17.1-201ENST00000362945 126 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AC005522.1-201ENST00000395416 346 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SLC28A1O00337 SNORA77-201ENST00000408716 125 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SLC28A1O00337 RN7SKP59-201ENST00000410520 314 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SLC28A1O00337 OR6K4P-201ENST00000423179 955 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 BX323845.1-201ENST00000432417 179 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 CACYBPP1-201ENST00000438592 684 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 RPS29P9-201ENST00000440360 171 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 PCNPP2-201ENST00000441651 455 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 AL354714.3-201ENST00000447284 493 ntBASIC4.83□□□□□ -1.64
SLC28A1O00337 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.83□□□□□ -1.64
SLC28A1O00337 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.83□□□□□ -1.64
SLC28A1O00337 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.83□□□□□ -1.64
SLC28A1O00337 RN7SL799P-201ENST00000475891 298 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms