Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRY2P-201ENST00000448860 689 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC018638.3-201ENST00000461273 132 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.54□□□□□ -1.68
UPK1AO00322 RN7SL808P-201ENST00000496066 299 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 RN7SL558P-201ENST00000497468 299 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 AC147055.3-201ENST00000510547 851 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 RPL21P7-201ENST00000557463 483 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 RN7SL176P-201ENST00000580352 264 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 SNORA74C-1-201ENST00000580726 201 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AP000919.1-201ENST00000582850 985 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 AL445222.1-201ENST00000607259 628 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 SDR42E1P1-201ENST00000611327 477 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC073575.2-201ENST00000614212 627 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC234782.5-201ENST00000617723 324 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC004232.3-201ENST00000622977 525 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 AC091905.4-201ENST00000623432 202 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
UPK1AO00322 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.54□□□□□ -1.68
UPK1AO00322 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
UPK1AO00322 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.54□□□□□ -1.68
UPK1AO00322 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK1AO00322 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 HMGB3P7-201ENST00000400214 611 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 SPTLC1P2-201ENST00000407089 121 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 SEPT7P8-201ENST00000413308 775 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AL358176.3-201ENST00000420757 454 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 RBMY2QP-201ENST00000429799 1147 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC092447.2-201ENST00000435487 669 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 CEACAMP7-201ENST00000444105 496 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 RPL7AP6-201ENST00000477943 801 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 RPL21P6-201ENST00000479171 504 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC110775.1-201ENST00000513721 462 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 RNU6-709P-201ENST00000517257 104 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 GCSHP4-201ENST00000538792 439 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC209154.1-201ENST00000582156 337 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 AC020910.3-201ENST00000603701 874 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC011453.2-201ENST00000603737 729 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AL121890.2-201ENST00000617644 465 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 AC012414.7-202ENST00000622705 1090 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.53□□□□□ -1.68
UPK1AO00322 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 RBPJP2-201ENST00000618187 1444 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 MIPEPP2-201ENST00000422560 1819 ntBASIC4.53□□□□□ -1.68
UPK1AO00322 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
UPK1AO00322 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.53□□□□□ -1.68
UPK1AO00322 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.53□□□□□ -1.69
UPK1AO00322 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
UPK1AO00322 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 RNU1-20P-201ENST00000363314 162 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 RNA5SP372-201ENST00000390836 115 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 RNA5SP146-201ENST00000410743 123 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1AO00322 VN1R37P-201ENST00000419096 748 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.52□□□□□ -1.69
UPK1AO00322 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.52□□□□□ -1.69
UPK1AO00322 AC112498.1-201ENST00000444401 332 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 snoU13.20-201ENST00000459180 104 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 RNU7-157P-201ENST00000459600 66 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC110749.1-201ENST00000462007 357 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 AC026348.1-201ENST00000462549 1053 ntBASIC4.52□□□□□ -1.69
UPK1AO00322 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms