Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 HCFC2P1-201ENST00000392864 1592 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 EOGT-210ENST00000615922 1931 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AP001002.1-201ENST00000625148 1513 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 OR56B2P-201ENST00000317102 954 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 RNU1-20P-201ENST00000363314 162 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AL391361.1-201ENST00000405580 489 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 OR13Z1P-201ENST00000416141 834 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AL645608.4-201ENST00000423619 154 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 OR6C71P-201ENST00000432580 913 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC093414.1-201ENST00000434712 514 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 PRPF38AP2-201ENST00000438179 851 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC005008.1-201ENST00000456151 612 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC135999.1-201ENST00000478962 479 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC090114.3-201ENST00000479267 829 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 RN7SL817P-201ENST00000480777 288 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 CYCSP28-201ENST00000534284 321 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 MIR4489-201ENST00000578869 62 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC026979.4-201ENST00000606555 645 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 ZNF733P-202ENST00000444809 1573 ntBASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRIM49D1C9J1S8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CIR1P2-201ENST00000514821 1342 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 MIR921-201ENST00000401133 56 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 MIR1286-201ENST00000408112 78 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 GJA6P-201ENST00000415117 1042 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AL606490.1-201ENST00000452266 765 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 RPS26P39-201ENST00000469206 341 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 RN7SL214P-201ENST00000487317 265 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC021733.2-201ENST00000518830 497 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC092490.3-201ENST00000545370 572 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC007225.2-201ENST00000562529 256 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC011453.2-201ENST00000603737 729 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC093799.2-201ENST00000610062 578 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 AC011815.3-201ENST00000624194 473 ntBASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.73□□□□□ -1.65
TRIM49D1C9J1S8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 UGT2B26P-201ENST00000508672 1613 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC007342.5-201ENST00000571340 2142 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RNA5SP296-201ENST00000410523 111 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 CBX1P3-201ENST00000413296 527 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC009237.10-201ENST00000414112 510 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RANP7-201ENST00000418085 644 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC004448.2-201ENST00000422360 586 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RPL7P11-201ENST00000437586 658 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AURKAPS1-201ENST00000451805 1212 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RN7SL172P-201ENST00000460535 303 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 ATP5G1P3-201ENST00000463301 410 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 BX284632.1-201ENST00000478218 541 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC090022.1-201ENST00000546569 311 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AL390334.1-201ENST00000556395 450 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 RN7SL802P-201ENST00000577858 299 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 MIR5699-201ENST00000578903 90 ntBASIC4.72□□□□□ -1.65
TRIM49D1C9J1S8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms