Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC004815.1-201ENST00000484185 331 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 GAPDHP56-201ENST00000506031 988 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RNU1-6P-201ENST00000516290 144 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC209154.1-201ENST00000582156 337 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC006272.2-201ENST00000594725 163 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 MIR6862-1-201ENST00000613016 70 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 MIR6862-2-201ENST00000614755 70 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC112694.2-201ENST00000623697 768 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 IRF5P1-201ENST00000504852 2164 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 NEAT1-202ENST00000501122 22743 ntBASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TRAV27A0A087WT01 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 BRAFP1-201ENST00000445336 2703 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 MIPEPP2-201ENST00000422560 1819 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 RNA5SP305-201ENST00000362665 119 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AL589647.1-201ENST00000402485 466 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 RN7SKP229-201ENST00000410465 302 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 RN7SKP97-201ENST00000410966 333 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC090142.1-201ENST00000465776 462 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC110775.1-201ENST00000513721 462 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC087763.1-201ENST00000603391 286 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AL512624.1-201ENST00000613638 469 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC073575.2-201ENST00000614212 627 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AL031119.1-201ENST00000404707 1879 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 AC007382.1-201ENST00000624376 2618 ntBASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.23□□□□□ -1.73
TRAV27A0A087WT01 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 SCN1A-220ENST00000641603 12506 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 OR56B2P-201ENST00000317102 954 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 RN7SKP104-201ENST00000362605 328 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 RNA5SP507-201ENST00000363603 121 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC002524.1-201ENST00000411687 547 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 OR51B3P-201ENST00000412287 913 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AL591848.1-201ENST00000413092 322 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 PPIAP13-201ENST00000434706 478 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 RPS5P7-201ENST00000456664 608 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC025164.1-201ENST00000496249 478 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.22□□□□□ -1.73
TRAV27A0A087WT01 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms