Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC012339.2-201ENST00000523996 453 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AP003049.1-201ENST00000529418 457 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 MIR4270-201ENST00000581799 70 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC012213.4-201ENST00000606457 354 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC016542.1-201ENST00000608259 493 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC253576.2-201ENST00000618815 580 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC099654.2-201ENST00000433031 1980 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.27□□□□□ -1.57
YIPF1Q9Y548 AC093909.5-201ENST00000621839 1799 ntBASIC5.27□□□□□ -1.57
YIPF1Q9Y548 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RNA5SP453-201ENST00000362503 119 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RNA5SP191-201ENST00000362585 102 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 MIR192-201ENST00000384915 110 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 ATP5HP3-201ENST00000396994 486 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 HMGB3P7-201ENST00000400214 611 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 ST13P16-201ENST00000401760 781 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RNA5SP113-201ENST00000410486 84 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC019050.1-201ENST00000418508 492 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RPS6P14-201ENST00000425165 719 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 NIPA2P1-201ENST00000426223 976 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC007559.1-201ENST00000428736 355 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 SDR42E1P3-201ENST00000438345 502 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RPL5P25-201ENST00000441148 775 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 CEACAMP9-201ENST00000442990 513 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 VN1R48P-201ENST00000448149 1036 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RAB28P3-201ENST00000448325 597 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AP002345.1-201ENST00000456493 928 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC008897.1-201ENST00000494006 347 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC092593.2-201ENST00000513866 913 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RNU6-889P-201ENST00000517189 103 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 MORF4L1P3-201ENST00000525966 950 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC006518.1-201ENST00000541449 943 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC019322.1-201ENST00000571869 389 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC091042.1-201ENST00000579213 173 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 MIMT1-201ENST00000597105 1050 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RNU6-84P-201ENST00000607737 102 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AP001521.2-201ENST00000608772 546 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AL391262.2-201ENST00000622466 494 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC079298.2-201ENST00000623885 459 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
YIPF1Q9Y548 AC140134.1-201ENST00000511830 3544 ntBASIC5.26□□□□□ -1.57
YIPF1Q9Y548 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 SAMMSON-226ENST00000642089 1582 ntBASIC5.25□□□□□ -1.57
YIPF1Q9Y548 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
YIPF1Q9Y548 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms