Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNU1-77P-201ENST00000390868 162 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 RN7SKP213-201ENST00000410746 298 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AL390774.1-201ENST00000411924 246 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 METTL15P3-201ENST00000415522 1221 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 RNGTTP1-201ENST00000420965 728 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 GLUD1P9-201ENST00000420997 1173 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 CEACAMP7-201ENST00000444105 496 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 MTND1P31-201ENST00000449206 961 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 MTCO2P6-201ENST00000463134 685 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 RPS4XP1-201ENST00000482189 787 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC021087.2-201ENST00000504656 1203 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 BOLA3P3-201ENST00000505182 232 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC093720.1-201ENST00000505681 714 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 OR8K4P-201ENST00000534608 872 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC010503.3-201ENST00000594355 540 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC093424.1-201ENST00000604999 338 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-84P-201ENST00000607737 102 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 OR7A19P-201ENST00000608051 733 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC015922.4-201ENST00000612568 690 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 CYCSP41-201ENST00000616920 296 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC009159.2-201ENST00000617603 606 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 AC005618.4-201ENST00000625053 554 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 MT-RNR2-201ENST00000387347 1559 ntBASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
SSX2IPQ9Y2D8 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 PWAR1-201ENST00000624188 2414 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-249P-201ENST00000363016 102 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RNA5SP335-201ENST00000363817 110 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-468P-201ENST00000384003 109 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC005042.1-201ENST00000393397 800 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AL133270.1-201ENST00000402635 279 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RPL35AP24-201ENST00000413846 330 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 UBE2V1P9-201ENST00000414760 368 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 NPM1P22-201ENST00000427761 952 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 FAM96AP1-201ENST00000430879 482 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 OR52B5P-201ENST00000435337 951 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC092447.2-201ENST00000435487 669 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RPL6P5-201ENST00000445678 828 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AL645937.3-201ENST00000453647 936 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 OR5H3P-201ENST00000502817 919 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 GLUD1P3-202ENST00000508551 200 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RN7SKP287-201ENST00000516546 266 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 MORF4L1P3-201ENST00000525966 950 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 PMS2P3-207ENST00000529061 717 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC126177.5-201ENST00000549599 178 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AL513327.3-201ENST00000602618 469 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC005034.4-201ENST00000603612 899 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC025811.1-201ENST00000604312 472 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms