Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.12□□□□□ -1.27
SHANK2Q9UPX8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC017079.1-201ENST00000333650 415 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AL354766.1-201ENST00000423396 542 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MTND2P28-201ENST00000457540 1044 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 SAP18P1-201ENST00000512058 390 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 NDUFB4P12-201ENST00000513465 390 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC006349.1-201ENST00000555526 235 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MAPK10-328ENST00000641553 4009 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 RNA5SP509-201ENST00000364577 119 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 OR6C69P-201ENST00000394268 893 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC007738.1-201ENST00000413892 348 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 RAD23BP1-201ENST00000421404 1227 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 CBX1P1-201ENST00000440184 427 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AP002812.1-201ENST00000495378 474 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC100847.1-201ENST00000611316 481 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 RNA5SP439-201ENST00000617595 124 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 AC010480.1-201ENST00000624823 684 ntBASIC7.11□□□□□ -1.27
SHANK2Q9UPX8 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AC017104.4-201ENST00000636283 1592 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AP001324.1-201ENST00000428553 399 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AC092162.1-201ENST00000432828 434 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AL049874.2-201ENST00000492636 288 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AC007016.1-201ENST00000512110 244 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AC012409.3-201ENST00000611343 981 ntBASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK2Q9UPX8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 MIR659-201ENST00000384963 97 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 ST13P16-201ENST00000401760 781 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 SNORA11.2-201ENST00000408318 127 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 IGKV2-23-201ENST00000518729 323 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 ARL6IP1P1-201ENST00000545836 610 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 ZYXP1-201ENST00000617638 118 ntBASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK2Q9UPX8 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.09□□□□□ -1.28
SHANK2Q9UPX8 OR14L1P-202ENST00000641545 3009 ntBASIC7.09□□□□□ -1.28
SHANK2Q9UPX8 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
SHANK2Q9UPX8 AC135352.1-201ENST00000506173 1418 ntBASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SHANK2Q9UPX8 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms