Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SIX4Q9UIU6 AC125336.1-201ENST00000508893 2827 ntBASIC5.37□□□□□ -1.55
SIX4Q9UIU6 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 IRF5P1-201ENST00000504852 2164 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 MIR133A2-201ENST00000347538 102 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AP002530.1-201ENST00000405705 684 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC096644.3-201ENST00000416788 338 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC073464.3-201ENST00000422564 712 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC023141.6-201ENST00000429418 337 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC093414.1-201ENST00000434712 514 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC021660.1-201ENST00000465006 554 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 RN7SL319P-201ENST00000480656 221 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AL049874.2-201ENST00000492636 288 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 MYL12BP2-201ENST00000503948 512 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 NDUFB5P1-201ENST00000508134 564 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AP003102.1-201ENST00000525638 661 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AP000676.2-201ENST00000529711 301 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC005000.1-201ENST00000536192 288 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC074276.2-201ENST00000619891 348 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC092376.2-201ENST00000622621 4116 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 AC131971.1-201ENST00000332881 1482 ntBASIC5.36□□□□□ -1.55
SIX4Q9UIU6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.36□□□□□ -1.55
SIX4Q9UIU6 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MTND6P32-201ENST00000457611 483 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 RN7SL610P-201ENST00000463845 291 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 RN7SL591P-201ENST00000496150 292 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC010374.2-201ENST00000512933 535 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC116553.2-201ENST00000564203 463 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MIR4436B2-201ENST00000581415 91 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MIR4436B1-201ENST00000583272 91 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 MIR4443-201ENST00000585052 53 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC011453.2-201ENST00000603737 729 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AL391834.1-201ENST00000609609 560 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AL356752.1-201ENST00000615844 593 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC063976.2-201ENST00000425667 3556 ntBASIC5.35□□□□□ -1.55
SIX4Q9UIU6 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.35□□□□□ -1.55
SIX4Q9UIU6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms