Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 MIR3200-201ENST00000580767 85 ntBASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.79□□□□□ -1.64
CHD7Q9P2D1 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC008033.1-201ENST00000216407 1162 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 MIR3065-201ENST00000390137 79 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 Z98745.1-201ENST00000402553 494 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 TCEA1P3-201ENST00000443005 880 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC011471.1-201ENST00000585766 187 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AL117378.2-201ENST00000622916 1337 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 RPL7P33-201ENST00000444159 742 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC022336.1-201ENST00000475510 337 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 Y_RNA.719-201ENST00000517156 106 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AP001804.2-201ENST00000533932 910 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 AC018695.5-201ENST00000605872 315 ntBASIC4.78□□□□□ -1.64
CHD7Q9P2D1 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CHD7Q9P2D1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CHD7Q9P2D1 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AL451142.1-201ENST00000375867 775 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 PTMAP2-201ENST00000397627 327 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC004980.3-201ENST00000447046 365 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AL049830.4-201ENST00000555149 351 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC020978.9-201ENST00000624380 1141 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 FTX-215ENST00000638681 9771 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 RPL23AP38-201ENST00000423801 469 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AL445584.1-201ENST00000431451 330 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 CYCSP43-201ENST00000438233 310 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC000095.2-202ENST00000637415 154 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 RLIMP1-201ENST00000339626 1680 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 EIF4A1P3-201ENST00000411521 244 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 E2F6P2-201ENST00000420708 748 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 VN1R105P-201ENST00000486595 910 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 OR5D2P-201ENST00000524390 911 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 OR5BC1P-201ENST00000529327 739 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 MIR3653-201ENST00000625572 110 ntBASIC4.77□□□□□ -1.65
CHD7Q9P2D1 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CHD7Q9P2D1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHD7Q9P2D1 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms