Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 CLIC4P3-201ENST00000422221 752 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC092832.1-201ENST00000422934 400 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 OR4F2P-201ENST00000424047 938 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AL365400.1-201ENST00000431854 640 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 Z83313.1-201ENST00000433780 718 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SDHDP2-201ENST00000436937 465 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC073188.1-201ENST00000442493 361 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 GRPEL2P3-201ENST00000448626 640 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 FTH1P27-201ENST00000449509 551 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 TMEM97P1-201ENST00000452969 451 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 RN7SL74P-201ENST00000464966 299 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 CBX5P1-201ENST00000468470 561 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 MNX1-204ENST00000469500 209 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AL163973.1-201ENST00000484753 577 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 UBA52P7-201ENST00000486088 380 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 UQCRBP3-201ENST00000509483 312 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 HMGN1P28-201ENST00000521340 364 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC091939.1-201ENST00000522704 691 ntTSL 3 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SSR2-215ENST00000529008 849 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC037471.2-201ENST00000564941 598 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC104687.2-201ENST00000604442 342 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AL049794.2-201ENST00000616301 365 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SNX18P5-201ENST00000619873 868 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC079684.1-201ENST00000621405 437 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AP001784.1-201ENST00000624107 428 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC112243.1-201ENST00000623949 3851 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 FMO5-202ENST00000369272 2168 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 AC073365.1-203ENST00000641055 1992 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 OR9M1P-202ENST00000641564 3163 ntBASIC9.24□□□□□ -0.93
RTN4Q9NQC3 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 STRADA-227ENST00000638309 1383 ntTSL 5 BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RTN4Q9NQC3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 PLCE1-AS1-203ENST00000596633 1683 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 PIGK-201ENST00000359130 1926 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 HSPE1P11-201ENST00000339579 310 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RNU4-73P-201ENST00000363164 141 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RNU6-74P-201ENST00000384235 107 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 Y_RNA.509-201ENST00000384506 99 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MIR1-2-201ENST00000384961 85 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 IGLV6-57-201ENST00000390285 353 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RN7SKP29-201ENST00000410957 272 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RN7SKP181-201ENST00000411188 316 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 EEF1A1P40-201ENST00000412883 573 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 GAPDHP32-201ENST00000433816 998 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RPL35AP22-201ENST00000436855 335 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RPS7P3-201ENST00000443360 580 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RPL7P14-201ENST00000449851 741 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 MED28P7-201ENST00000456611 530 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 snoU109.4-201ENST00000458953 143 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 GCSAM-202ENST00000460387 623 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC004917.1-202ENST00000475791 760 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RPL7AP23-201ENST00000482625 776 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 RN7SL702P-201ENST00000488394 292 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC095059.2-201ENST00000510601 933 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 Y_RNA.675-201ENST00000516389 149 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC9.23□□□□□ -0.93
RTN4Q9NQC3 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 TMEM107-209ENST00000533070 726 ntAPPRIS ALT1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RTN4Q9NQC3 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC9.23□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms