Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 OR5AZ1P-201ENST00000527448 943 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 AC012616.1-201ENST00000600294 197 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 AC012414.7-202ENST00000622705 1090 ntBASIC5.12□□□□□ -1.59
TRIM4Q9C037 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM4Q9C037 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM4Q9C037 MAPK10-320ENST00000641462 6696 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 OR52B1P-201ENST00000316506 909 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 TRGV5P-201ENST00000419915 354 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC017019.1-201ENST00000426129 261 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC073648.4-201ENST00000442655 781 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 NDUFA12P1-201ENST00000455914 406 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 RPL7AP28-201ENST00000464513 571 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 RN7SL354P-201ENST00000469282 294 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 HMGN1P9-201ENST00000515212 298 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 RN7SKP147-201ENST00000517154 244 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AF186190.1-201ENST00000517470 480 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC005000.1-201ENST00000536192 288 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC209154.1-201ENST00000582156 337 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC244107.2-201ENST00000611773 76 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 AC006840.1-201ENST00000623069 542 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 LINC01739-205ENST00000641890 573 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 VN2R3P-201ENST00000422626 1412 ntBASIC5.11□□□□□ -1.59
TRIM4Q9C037 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM4Q9C037 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM4Q9C037 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC126755.2-208ENST00000327792 462 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC138969.1-213ENST00000331436 462 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 RN7SKP6-201ENST00000364795 319 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 P2RY10P2-201ENST00000416730 913 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 PRPF38AP2-201ENST00000438179 851 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 MTCYBP21-201ENST00000443300 1113 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 SNRPCP2-201ENST00000504370 475 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 IGBP1P5-201ENST00000507524 1000 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 AP005119.2-201ENST00000579735 1105 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.1□□□□□ -1.59
TRIM4Q9C037 SNORD91B-202ENST00000608459 222 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 MIR8069-1-201ENST00000616627 86 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 AL121890.2-201ENST00000617644 465 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 MIR8069-2-201ENST00000621412 86 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 uc_338.7-201ENST00000621834 124 ntBASIC5.1□□□□□ -1.59
TRIM4Q9C037 AC015660.5-201ENST00000623238 564 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms