Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RN7SL570P-201ENST00000484405 292 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 Y_RNA.667-201ENST00000516212 107 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 RN7SKP253-201ENST00000516424 309 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP438-201ENST00000516561 112 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 TOMM20P1-201ENST00000534518 427 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC145350.1-201ENST00000567426 208 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 PCNAP1-202ENST00000595299 752 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AL121594.5-201ENST00000631724 573 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 BX649567.1-201ENST00000642071 1134 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 AC093671.1-201ENST00000624981 2929 ntBASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
TRIM54Q9BYV2 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC109446.4-201ENST00000623235 2755 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 TMSB4XP2-201ENST00000335179 210 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP273-201ENST00000362484 113 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RNA5SP477-201ENST00000362639 119 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 MIR525-201ENST00000384978 85 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC119751.3-201ENST00000399720 670 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL354890.1-201ENST00000413730 346 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC107081.1-201ENST00000414975 361 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RNF10P1-201ENST00000418589 369 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 VTI1BP4-201ENST00000427516 527 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 HIGD1AP12-201ENST00000427832 281 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ARL5AP2-201ENST00000444698 533 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RPS27AP2-201ENST00000457576 465 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC093166.4-201ENST00000457867 318 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RNU7-140P-201ENST00000459546 60 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC005410.1-202ENST00000460347 485 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC110749.1-201ENST00000462007 357 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC096741.1-201ENST00000472250 846 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC004263.1-201ENST00000479327 332 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 RPS7P6-201ENST00000485777 579 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 HPRT1P2-201ENST00000505250 544 ntBASIC5.61□□□□□ -1.51
TRIM54Q9BYV2 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms