Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RPL7AP61-201ENST00000443410 636 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 Z80107.2-201ENST00000445127 392 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 CDY20P-201ENST00000447528 1279 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC100832.1-201ENST00000471945 383 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 EIF1P7-201ENST00000487533 337 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 RNA5SP392-201ENST00000516905 112 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 SAMMSON-209ENST00000641222 1100 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 DDX18P5-201ENST00000534547 1306 ntBASIC3.67□□□□□ -1.82
AP1S3Q96PC3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
AP1S3Q96PC3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 RNA5SP234-201ENST00000363916 119 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 MIR195-201ENST00000385194 87 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 RNA5SP339-201ENST00000390987 122 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL133325.1-201ENST00000421090 382 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC092162.1-201ENST00000432828 434 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 TXNP5-201ENST00000441043 315 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC011753.3-201ENST00000443436 406 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 MTND4LP12-201ENST00000448237 295 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 RPL10P17-201ENST00000453852 316 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 Z92846.1-201ENST00000456203 268 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC006967.1-201ENST00000467608 589 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 LDHBP3-201ENST00000514909 822 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AP002981.1-201ENST00000517692 975 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC090281.1-201ENST00000523019 276 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 PDCD5P1-201ENST00000543528 309 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC007066.2-202ENST00000566531 914 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 MIR1273E-201ENST00000581165 102 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 MIR4505-201ENST00000582238 73 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 MIR8080-201ENST00000622224 89 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 CASC19-206ENST00000641028 1430 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 ASNSP1-201ENST00000518311 1939 ntBASIC3.66□□□□□ -1.82
AP1S3Q96PC3 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
AP1S3Q96PC3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.65□□□□□ -1.82
AP1S3Q96PC3 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
AP1S3Q96PC3 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AL353625.1-202ENST00000366273 571 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
AP1S3Q96PC3 RNU6-178P-201ENST00000384631 104 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 HMGB3P7-201ENST00000400214 611 ntBASIC3.65□□□□□ -1.83
AP1S3Q96PC3 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms